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Mondo, Stephen

TitleBusiness/Systems Analyst 3
InstitutionLawrence Berkeley National Lab
DepartmentJoint Genome Institute
Address1 Cyclotron Road
Berkeley CA 94720
Phone925/296-5819
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Kijpornyongpan T, Mondo S, Barry K, Sandor L, Lee J, Lipzen A, Pangilinan J, LaButti K, Hainaut M, Henrissat B, Grigoriev IV, Spatafora JW, Aime MC. Broad genomic sampling reveals a smut pathogenic ancestry of the fungal clade Ustilaginomycotina. Mol Biol Evol. 2018 May 15. PMID: 29771364.
      View in: PubMed
    2. Gryganskyi AP, Golan J, Dolatabadi S, Mondo S, Robb S, Idnurm A, Muszewska A, Steczkiewicz K, Masonjones S, Liao HL, Gajdeczka MT, Anike F, Vuek A, Anishchenko IM, Voigt K, de Hoog GS, Smith ME, Heitman J, Vilgalys R, Stajich JE. Phylogenetic and Phylogenomic Definition of Rhizopus Species. G3 (Bethesda). 2018 Apr 19. PMID: 29674435.
      View in: PubMed
    3. Coradetti ST, Pinel D, Geiselman GM, Ito M, Mondo S, Reilly MC, Cheng YF, Bauer S, Grigoriev IV, Gladden JM, Simmons BA, Brem RB, Arkin AP, Skerker JM. Functional genomics of lipid metabolism in the oleaginous yeast Rhodosporidium toruloides. Elife. 2018 Mar 09; 7. PMID: 29521624.
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    4. Kjærbølling I, Vesth TC, Frisvad JC, Nybo JL, Theobald S, Kuo A, Bowyer P, Matsuda Y, Mondo S, Lyhne EK, Kogle ME, Clum A, Lipzen A, Salamov A, Ngan CY, Daum C, Chiniquy J, Barry K, LaButti K, Haridas S, Simmons BA, Magnuson JK, Mortensen UH, Larsen TO, Grigoriev IV, Baker SE, Andersen MR. Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species. Proc Natl Acad Sci U S A. 2018 Jan 09. PMID: 29317534.
      View in: PubMed
    5. Mondo S, Kuo RC, Singan VR. Fungal Epigenomics: Detection and Analysis. Methods Mol Biol. 2018; 1775:155-170. PMID: 29876817.
      View in: PubMed
    6. Mondo S, Lastovetsky OA, Gaspar ML, Schwardt NH, Barber CC, Riley R, Sun H, Grigoriev IV, Pawlowska TE. Bacterial endosymbionts influence host sexuality and reveal reproductive genes of early divergent fungi. Nat Commun. 2017 Nov 29; 8(1):1843. PMID: 29184190.
      View in: PubMed
    7. Aime MC, McTaggart AR, Mondo S, Duplessis S. Phylogenetics and Phylogenomics of Rust Fungi. Adv Genet. 2017; 100:267-307. PMID: 29153402.
      View in: PubMed
    8. Haitjema CH, Gilmore SP, Henske JK, Solomon KV, de Groot R, Kuo A, Mondo S, Salamov AA, LaButti K, Zhao Z, Chiniquy J, Barry K, Brewer HM, Purvine SO, Wright AT, Hainaut M, Boxma B, van Alen T, Hackstein JHP, Henrissat B, Baker SE, Grigoriev IV, O'Malley MA. A parts list for fungal cellulosomes revealed by comparative genomics. Nat Microbiol. 2017 May 30; 2:17087. PMID: 28555641.
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    9. Mondo S, Dannebaum RO, Kuo RC, Louie KB, Bewick AJ, LaButti K, Haridas S, Kuo A, Salamov A, Ahrendt SR, Lau R, Bowen BP, Lipzen A, Sullivan W, Andreopoulos BB, Clum A, Lindquist E, Daum C, Northen TR, Kunde-Ramamoorthy G, Schmitz RJ, Gryganskyi A, Culley D, Magnuson J, James TY, O'Malley MA, Stajich JE, Spatafora JW, Visel A, Grigoriev IV. Widespread adenine N6-methylation of active genes in fungi. Nat Genet. 2017 Jun; 49(6):964-968. PMID: 28481340.
      View in: PubMed
    10. Lastovetsky OA, Gaspar ML, Mondo S, LaButti KM, Sandor L, Grigoriev IV, Henry SA, Pawlowska TE. Lipid metabolic changes in an early divergent fungus govern the establishment of a mutualistic symbiosis with endobacteria. Proc Natl Acad Sci U S A. 2016 12 27; 113(52):15102-15107. PMID: 27956601.
      View in: PubMed
    11. Walker AK, Frasz SL, Seifert KA, Miller JD, Mondo S, LaButti K, Lipzen A, Dockter RB, Kennedy MC, Grigoriev IV, Spatafora JW. Erratum for Walker et al., Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin. Genome Announc. 2016 May 26; 4(3). PMID: 27231381; PMCID: PMC4882962.
    12. Mondo S, Salvioli A, Bonfante P, Morton JB, Pawlowska TE. Nondegenerative Evolution in Ancient Heritable Bacterial Endosymbionts of Fungi. Mol Biol Evol. 2016 09; 33(9):2216-31. PMID: 27189571.
      View in: PubMed
    13. Walker AK, Frasz SL, Seifert KA, Miller JD, Mondo S, LaButti K, Lipzen A, Dockter RB, Kennedy MC, Grigoriev IV, Spatafora JW. Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin. Genome Announc. 2016 Feb 25; 4(1). PMID: 26950333; PMCID: PMC4767923.
    14. Toomer KH, Chen X, Naito M, Mondo S, den Bakker HC, VanKuren NW, Lekberg Y, Morton JB, Pawlowska TE. Molecular evolution patterns reveal life history features of mycoplasma-related endobacteria associated with arbuscular mycorrhizal fungi. Mol Ecol. 2015 Jul; 24(13):3485-500. PMID: 26011293.
      View in: PubMed
    15. Desirò A, Salvioli A, Ngonkeu EL, Mondo S, Epis S, Faccio A, Kaech A, Pawlowska TE, Bonfante P. Detection of a novel intracellular microbiome hosted in arbuscular mycorrhizal fungi. ISME J. 2014 Feb; 8(2):257-70. PMID: 24008325; PMCID: PMC3906812.
    16. Mondo S, Toomer KH, Morton JB, Lekberg Y, Pawlowska TE. Evolutionary stability in a 400-million-year-old heritable facultative mutualism. Evolution. 2012 Aug; 66(8):2564-76. PMID: 22834753.
      View in: PubMed
    17. Pumplin N, Mondo S, Topp S, Starker CG, Gantt JS, Harrison MJ. Medicago truncatula Vapyrin is a novel protein required for arbuscular mycorrhizal symbiosis. Plant J. 2010 Feb 01; 61(3):482-94. PMID: 19912567.
      View in: PubMed
    18. Andam CP, Mondo S, Parker MA. Monophyly of nodA and nifH genes across Texan and Costa Rican populations of Cupriavidus nodule symbionts. Appl Environ Microbiol. 2007 Jul; 73(14):4686-90. PMID: 17526782; PMCID: PMC1932833.
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