Gupta, Sayan

TitleResearch Assoc Sr
InstitutionLawrence Berkeley National Lab
DepartmentMolecular Biophys & Integ Bio
Address1 Cyclotron Road
Berkeley CA 94720
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Fukushima T, Gupta S, Rad B, Cornejo JA, Petzold CJ, Chan LJG, Mizrahi RA, Ralston CY, Ajo-Franklin CM. The Molecular Basis for Binding of an Electron Transfer Protein to a Metal Oxide Surface. J Am Chem Soc. 2017 Sep 13; 139(36):12647-12654. PMID: 28806874.
      View in: PubMed
    2. Gupta S, Feng J, Chan LJ, Petzold CJ, Ralston CY. Synchrotron X-ray footprinting as a method to visualize water in proteins. J Synchrotron Radiat. 2016 Sep 01; 23(Pt 5):1056-69. PMID: 27577756; PMCID: PMC5006651 [Available on 09/01/17].
    3. Hulscher RM, Bohon J, Rappé MC, Gupta S, D'Mello R, Sullivan M, Ralston CY, Chance MR, Woodson SA. Probing the structure of ribosome assembly intermediates in vivo using DMS and hydroxyl radical footprinting. Methods. 2016 07 01; 103:49-56. PMID: 27016143; PMCID: PMC4921310 [Available on 07/01/17].
    4. Gupta S, Feng J, Chance M, Ralston C. Recent Advances and Applications in Synchrotron X-Ray Protein Footprinting for Protein Structure and Dynamics Elucidation. Protein Pept Lett. 2016; 23(3):309-22. PMID: 26833224.
      View in: PubMed
    5. Bavro VN, Gupta S, Ralston C. Oxidative footprinting in the study of structure and function of membrane proteins: current state and perspectives. Biochem Soc Trans. 2015 Oct; 43(5):983-94. PMID: 26517913.
      View in: PubMed
    6. Gupta S, Guttman M, Leverenz RL, Zhumadilova K, Pawlowski EG, Petzold CJ, Lee KK, Ralston CY, Kerfeld CA. Local and global structural drivers for the photoactivation of the orange carotenoid protein. Proc Natl Acad Sci U S A. 2015 Oct 13; 112(41):E5567-74. PMID: 26385969; PMCID: PMC4611662.
    7. Leverenz RL, Sutter M, Wilson A, Gupta S, Thurotte A, Bourcier de Carbon C, Petzold CJ, Ralston C, Perreau F, Kirilovsky D, Kerfeld CA. PHOTOSYNTHESIS. A 12 Å carotenoid translocation in a photoswitch associated with cyanobacterial photoprotection. Science. 2015 Jun 26; 348(6242):1463-6. PMID: 26113721.
      View in: PubMed
    8. Gupta S, Chai J, Cheng J, D'Mello R, Chance MR, Fu D. Visualizing the kinetic power stroke that drives proton-coupled zinc(II) transport. Nature. 2014 Aug 07; 512(7512):101-4. PMID: 25043033; PMCID: PMC4144069.
    9. Gupta S, Celestre R, Petzold CJ, Chance MR, Ralston C. Development of a microsecond X-ray protein footprinting facility at the Advanced Light Source. J Synchrotron Radiat. 2014 Jul; 21(Pt 4):690-9. PMID: 24971962; PMCID: PMC4073957.
    10. Salanga CL, Dyer DP, Kiselar JG, Gupta S, Chance MR, Handel TM. Multiple glycosaminoglycan-binding epitopes of monocyte chemoattractant protein-3/CCL7 enable it to function as a non-oligomerizing chemokine. J Biol Chem. 2014 May 23; 289(21):14896-912. PMID: 24727473; PMCID: PMC4031540.
    11. Bohon J, D'Mello R, Ralston C, Gupta S, Chance MR. Synchrotron X-ray footprinting on tour. J Synchrotron Radiat. 2014 Jan; 21(Pt 1):24-31. PMID: 24365913; PMCID: PMC3874017.
    12. Padayatti PS, Wang L, Gupta S, Orban T, Sun W, Salom D, Jordan SR, Palczewski K, Chance MR. A hybrid structural approach to analyze ligand binding by the serotonin type 4 receptor (5-HT4). Mol Cell Proteomics. 2013 May; 12(5):1259-71. PMID: 23378516; PMCID: PMC3650337.
    13. Gupta S, D'Mello R, Chance MR. Structure and dynamics of protein waters revealed by radiolysis and mass spectrometry. Proc Natl Acad Sci U S A. 2012 Sep 11; 109(37):14882-7. PMID: 22927377; PMCID: PMC3443160.
    14. Orban T, Jastrzebska B, Gupta S, Wang B, Miyagi M, Chance MR, Palczewski K. Conformational dynamics of activation for the pentameric complex of dimeric G protein-coupled receptor and heterotrimeric G protein. Structure. 2012 May 09; 20(5):826-40. PMID: 22579250; PMCID: PMC3351692.
    15. Chaudhuri BN, Gupta S, Urban VS, Chance MR, D'Mello R, Smith L, Lyons K, Gee J. A combined global and local approach to elucidate spatial organization of the Mycobacterial ParB-parS partition assembly. Biochemistry. 2011 Mar 22; 50(11):1799-807. PMID: 21142182; PMCID: PMC3081668.
    16. Gupta S, Bavro VN, D'Mello R, Tucker SJ, Vénien-Bryan C, Chance MR. Conformational changes during the gating of a potassium channel revealed by structural mass spectrometry. Structure. 2010 Jul 14; 18(7):839-46. PMID: 20637420.
      View in: PubMed
    17. Orban T, Gupta S, Palczewski K, Chance MR. Visualizing water molecules in transmembrane proteins using radiolytic labeling methods. Biochemistry. 2010 Feb 09; 49(5):827-34. PMID: 20047303; PMCID: PMC2819031.
    18. Angel TE, Gupta S, Jastrzebska B, Palczewski K, Chance MR. Structural waters define a functional channel mediating activation of the GPCR, rhodopsin. Proc Natl Acad Sci U S A. 2009 Aug 25; 106(34):14367-72. PMID: 19706523; PMCID: PMC2732891.
    19. Gupta S, Mazumdar S. Inhibition of bacterial oxidases by formamide and analogs. Biol Chem. 2008 May; 389(5):599-607. PMID: 18953727.
      View in: PubMed
    20. Sullivan MR, Rekhi S, Bohon J, Gupta S, Abel D, Toomey J, Chance MR. Installation and testing of a focusing mirror at beamline X28C for high flux x-ray radiolysis of biological macromolecules. Rev Sci Instrum. 2008 Feb; 79(2 Pt 1):025101. PMID: 18315323.
      View in: PubMed
    21. Gupta S, Cheng H, Mollah AK, Jamison E, Morris S, Chance MR, Khrapunov S, Brenowitz M. DNA and protein footprinting analysis of the modulation of DNA binding by the N-terminal domain of the Saccharomyces cerevisiae TATA binding protein. Biochemistry. 2007 Sep 04; 46(35):9886-98. PMID: 17683121.
      View in: PubMed
    22. Gupta S, Sullivan M, Toomey J, Kiselar J, Chance MR. The Beamline X28C of the Center for Synchrotron Biosciences: a national resource for biomolecular structure and dynamics experiments using synchrotron footprinting. J Synchrotron Radiat. 2007 May; 14(Pt 3):233-43. PMID: 17435298.
      View in: PubMed
    23. Shcherbakova I, Gupta S, Chance MR, Brenowitz M. Monovalent ion-mediated folding of the Tetrahymena thermophila ribozyme. J Mol Biol. 2004 Oct 01; 342(5):1431-42. PMID: 15364572.
      View in: PubMed
    24. Gupta S, Mangel WF, McGrath WJ, Perek JL, Lee DW, Takamoto K, Chance MR. DNA binding provides a molecular strap activating the adenovirus proteinase. Mol Cell Proteomics. 2004 Oct; 3(10):950-9. PMID: 15220401.
      View in: PubMed
    25. Das N, Gupta S, Mazumdar S. Direct observation of release of cytochrome c from lipid-encapsulated protein by peroxide and superoxide: a possible mechanism for drug-induced apoptosis. Biochem Biophys Res Commun. 2001 Aug 17; 286(2):311-4. PMID: 11500038.
      View in: PubMed
    26. Gupta S, Warne A, Saraste M, Mazumdar S. pH-induced conformational transition in the soluble CuA domain of Paracoccus denitrificans cytochrome oxidase. Biochemistry. 2001 May 22; 40(20):6180-9. PMID: 11352755.
      View in: PubMed
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