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    Pereira, Jose

    TitleBiochemist Research Sci/Engr
    SchoolLawrence Berkeley National Lab
    DepartmentMolecular Biophys & Integ Bio
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone510/486-4790
    vCardDownload vCard

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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. McAndrew RP, Sathitsuksanoh N, Mbughuni MM, Heins RA, Pereira J, George A, Sale KL, Fox BG, Simmons BA, Adams PD. Reply to Kiser: Dioxygen binding in NOV1 crystal structures. Proc Natl Acad Sci U S A. 2017 Jul 25; 114(30):E6029-E6030. PMID: 28679635.
        View in: PubMed
      2. Pereira J, McAndrew RP, Sergeeva OA, Ralston CY, King JA, Adams PD. Structure of the human TRiC/CCT Subunit 5 associated with hereditary sensory neuropathy. Sci Rep. 2017 Jun 16; 7(1):3673. PMID: 28623285.
        View in: PubMed
      3. McAndrew RP, Sathitsuksanoh N, Mbughuni MM, Heins RA, Pereira J, George A, Sale KL, Fox BG, Simmons BA, Adams PD. Structure and mechanism of NOV1, a resveratrol-cleaving dioxygenase. Proc Natl Acad Sci U S A. 2016 Dec 13; 113(50):14324-14329. PMID: 27911781.
        View in: PubMed
      4. Pereira J, Heins RA, Gall DL, McAndrew RP, Deng K, Holland KC, Donohue TJ, Noguera DR, Simmons BA, Sale KL, Ralph J, Adams PD. Structural and Biochemical Characterization of the Early and Late Enzymes in the Lignin ß-Aryl Ether Cleavage Pathway from Sphingobium sp. SYK-6. J Biol Chem. 2016 May 06; 291(19):10228-38. PMID: 26940872; PMCID: PMC4858972.
      5. Eudes A, Pereira J, Yogiswara S, Wang G, Teixeira Benites V, Baidoo EE, Lee TS, Adams PD, Keasling JD, Loqué D. Exploiting the Substrate Promiscuity of Hydroxycinnamoyl-CoA:Shikimate Hydroxycinnamoyl Transferase to Reduce Lignin. Plant Cell Physiol. 2016 Mar; 57(3):568-79. PMID: 26858288; PMCID: PMC4790474.
      6. McAndrew R, Pruitt RN, Kamita SG, Pereira J, Majumdar D, Hammock BD, Adams PD, Ronald PC. Structure of the OsSERK2 leucine-rich repeat extracellular domain. Acta Crystallogr D Biol Crystallogr. 2014 Nov; 70(Pt 11):3080-6. PMID: 25372696; PMCID: PMC4220978.
      7. Pereira J, Petchprayoon C, Hoepker AC, Moriarty NW, Fink SJ, Cecere G, Paterson I, Adams PD, Marriott G. Structural and biochemical studies of actin in complex with synthetic macrolide tail analogues. ChemMedChem. 2014 Oct; 9(10):2286-93. PMID: 25047814; PMCID: PMC4213943.
      8. Kung Y, McAndrew RP, Xie X, Liu CC, Pereira J, Adams PD, Keasling JD. Constructing tailored isoprenoid products by structure-guided modification of geranylgeranyl reductase. Structure. 2014 Jul 08; 22(7):1028-36. PMID: 24954619.
        View in: PubMed
      9. Chen Z, Pereira J, Liu H, Tran HM, Hsu NS, Dibble D, Singh S, Adams PD, Sapra R, Hadi MZ, Simmons BA, Sale KL. Improved activity of a thermophilic cellulase, Cel5A, from Thermotoga maritima on ionic liquid pretreated switchgrass. PLoS One. 2013; 8(11):e79725. PMID: 24244549; PMCID: PMC3828181.
      10. Javidpour P, Pereira J, Goh EB, McAndrew RP, Ma SM, Friedland GD, Keasling JD, Chhabra SR, Adams PD, Beller HR. Biochemical and structural studies of NADH-dependent FabG used to increase the bacterial production of fatty acids under anaerobic conditions. Appl Environ Microbiol. 2014 Jan; 80(2):497-505. PMID: 24212572; PMCID: PMC3911115.
      11. Pereira J, Goh EB, Keasling JD, Beller HR, Adams PD. Structure of FabH and factors affecting the distribution of branched fatty acids in Micrococcus luteus. Acta Crystallogr D Biol Crystallogr. 2012 Oct; 68(Pt 10):1320-8. PMID: 22993086; PMCID: PMC3447401.
      12. Chen Z, Friedland GD, Pereira J, Reveco SA, Chan R, Park JI, Thelen MP, Adams PD, Arkin AP, Keasling JD, Blanch HW, Simmons BA, Sale KL, Chivian D, Chhabra SR. Tracing determinants of dual substrate specificity in glycoside hydrolase family 5. J Biol Chem. 2012 Jul 20; 287(30):25335-43. PMID: 22645145; PMCID: PMC3408205.
      13. Pereira J, Ralston CY, Douglas NR, Kumar R, Lopez T, McAndrew RP, Knee KM, King JA, Frydman J, Adams PD. Mechanism of nucleotide sensing in group II chaperonins. EMBO J. 2012 Feb 01; 31(3):731-40. PMID: 22193720; PMCID: PMC3273386.
      14. McAndrew RP, Peralta-Yahya PP, DeGiovanni A, Pereira J, Hadi MZ, Keasling JD, Adams PD. Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production. Structure. 2011 Dec 07; 19(12):1876-84. PMID: 22153510.
        View in: PubMed
      15. Pereira J, Chen Z, McAndrew RP, Sapra R, Chhabra SR, Sale KL, Simmons BA, Adams PD. Biochemical characterization and crystal structure of endoglucanase Cel5A from the hyperthermophilic Thermotoga maritima. J Struct Biol. 2010 Dec; 172(3):372-9. PMID: 20599513.
        View in: PubMed
      16. Pereira J, Ralston CY, Douglas NR, Meyer D, Knee KM, Goulet DR, King JA, Frydman J, Adams PD. Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle. J Biol Chem. 2010 Sep 03; 285(36):27958-66. PMID: 20573955; PMCID: PMC2934662.
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