Loading...
Sign in to edit your profile (add interests, overview, photo, etc.)

    Spindel, Jennifer

    TitleComputational Bio PD Fellow
    SchoolLawrence Berkeley National Lab
    DepartmentJoint Genome Institute
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone503/407-5890
    vCardDownload vCard

      Collapse Bibliographic 
      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
      List All   |   Timeline
      1. Spindel J, McCouch SR. When more is better: how data sharing would accelerate genomic selection of crop plants. New Phytol. 2016 Dec; 212(4):814-826. PMID: 27716975.
        View in: PubMed
      2. Bimber BN, Raboin MJ, Letaw J, Nevonen KA, Spindel J, McCouch SR, Cervera-Juanes R, Spindel E, Carbone L, Ferguson B, Vinson A. Whole-genome characterization in pedigreed non-human primates using genotyping-by-sequencing (GBS) and imputation. BMC Genomics. 2016; 17:676. PMID: 27558348.
        View in: PubMed
      3. Biscarini F, Cozzi P, Casella L, Riccardi P, Vattari A, Orasen G, Perrini R, Tacconi G, Tondelli A, Biselli C, Cattivelli L, Spindel J, McCouch S, Abbruscato P, Valé G, Piffanelli P, Greco R. Genome-Wide Association Study for Traits Related to Plant and Grain Morphology, and Root Architecture in Temperate Rice Accessions. PLoS One. 2016; 11(5):e0155425. PMID: 27228161; PMCID: PMC4881974.
      4. Spindel J, Begum H, Akdemir D, Collard B, Redoña E, Jannink JL, McCouch S. Genome-wide prediction models that incorporate de novo GWAS are a powerful new tool for tropical rice improvement. Heredity (Edinb). 2016 Apr; 116(4):395-408. PMID: 26860200; PMCID: PMC4806696.
      5. Spindel J, Wright M, Chen C, Cobb J, Gage J, Harrington S, Lorieux M, Ahmadi N, McCouch S. Erratum to: Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations. Theor Appl Genet. 2016 Jan; 129(1):201-2. PMID: 26520113.
        View in: PubMed
      6. Spindel J, Begum H, Akdemir D, Virk P, Collard B, Redoña E, Atlin G, Jannink JL, McCouch SR. Correction: Genomic Selection and Association Mapping in Rice (Oryza sativa): Effect of Trait Genetic Architecture, Training Population Composition, Marker Number and Statistical Model on Accuracy of Rice Genomic Selection in Elite, Tropical Rice Breeding Lines. PLoS Genet. 2015 Jun; 11(6):e1005350. PMID: 26125618; PMCID: PMC4488320.
      7. Yan J, Aboshi T, Teraishi M, Strickler SR, Spindel J, Tung CW, Takata R, Matsumoto F, Maesaka Y, McCouch SR, Okumoto Y, Mori N, Jander G. The Tyrosine Aminomutase TAM1 Is Required for ß-Tyrosine Biosynthesis in Rice. Plant Cell. 2015 Apr; 27(4):1265-78. PMID: 25901084; PMCID: PMC4558700.
      8. Begum H, Spindel J, Lalusin A, Borromeo T, Gregorio G, Hernandez J, Virk P, Collard B, McCouch SR. Genome-wide association mapping for yield and other agronomic traits in an elite breeding population of tropical rice (Oryza sativa). PLoS One. 2015; 10(3):e0119873. PMID: 25785447; PMCID: PMC4364887.
      9. Spindel J, Begum H, Akdemir D, Virk P, Collard B, Redoña E, Atlin G, Jannink JL, McCouch SR. Genomic selection and association mapping in rice (Oryza sativa): effect of trait genetic architecture, training population composition, marker number and statistical model on accuracy of rice genomic selection in elite, tropical rice breeding lines. PLoS Genet. 2015 Feb; 11(2):e1004982. PMID: 25689273; PMCID: PMC4334555.
      10. Spindel J, Wright M, Chen C, Cobb J, Gage J, Harrington S, Lorieux M, Ahmadi N, McCouch S. Bridging the genotyping gap: using genotyping by sequencing (GBS) to add high-density SNP markers and new value to traditional bi-parental mapping and breeding populations. Theor Appl Genet. 2013 Nov; 126(11):2699-716. PMID: 23918062.
        View in: PubMed
      11. Jurkuta RJ, Kaplinsky NJ, Spindel J, Barton MK. Partitioning the apical domain of the Arabidopsis embryo requires the BOBBER1 NudC domain protein. Plant Cell. 2009 Jul; 21(7):1957-71. PMID: 19648297; PMCID: PMC2729608.

      A U.S. Department of Energy National Laboratory Managed by the University of California

      This site is running Profiles RNS version v2.10.0-410-g1c0064ed.