Carlson, Hans

TitleBiochemist Research Sci/Engr
InstitutionLawrence Berkeley National Lab
DepartmentEnviron Genomics & Systems Bio
Address1 Cyclotron Road
Berkeley CA 94720
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Price MN, Wetmore KM, Waters RJ, Callaghan M, Ray J, Liu H, Kuehl JV, Melnyk RA, Lamson JS, Suh Y, Carlson H, Esquivel Z, Sadeeshkumar H, Chakraborty R, Zane GM, Rubin BE, Wall JD, Visel A, Bristow J, Blow MJ, Arkin AP, Deutschbauer AM. Mutant phenotypes for thousands of bacterial genes of unknown function. Nature. 2018 May; 557(7706):503-509. PMID: 29769716.
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    2. Wang O, Melnyk RA, Mehta-Kolte MG, Youngblut MD, Carlson H, Coates JD. Functional Redundancy in Perchlorate and Nitrate Electron Transport Chains and Rewiring Respiratory Pathways to Alter Terminal Electron Acceptor Preference. Front Microbiol. 2018; 9:376. PMID: 29559962.
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    3. Liu H, Price MN, Waters RJ, Ray J, Carlson H, Lamson JS, Chakraborty R, Arkin AP, Deutschbauer AM. Magic Pools: Parallel Assessment of Transposon Delivery Vectors in Bacteria. mSystems. 2018 Jan-Feb; 3(1). PMID: 29359196.
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    4. Carlson H, Deutschbauer A, Coates J. Microbial metal resistance and metabolism across dynamic landscapes: high-throughput environmental microbiology. F1000Res. 2017; 6:1026. PMID: 28721211.
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    5. Carlson H, Mullan MR, Mosqueda LA, Chen S, Arkin MR, Coates JD. High-Throughput Screening To Identify Potent and Specific Inhibitors of Microbial Sulfate Reduction. Environ Sci Technol. 2017 Jun 20; 51(12):7278-7285. PMID: 28492331.
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    6. Bosak T, Schubotz F, de Santiago-Torio A, Kuehl JV, Carlson H, Watson N, Daye M, Summons RE, Arkin AP, Deutschbauer AM. System-Wide Adaptations of Desulfovibrio alaskensis G20 to Phosphate-Limited Conditions. PLoS One. 2016; 11(12):e0168719. PMID: 28030630.
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    7. Youngblut MD, Tsai CL, Clark IC, Carlson H, Maglaqui AP, Gau-Pan PS, Redford SA, Wong A, Tainer JA, Coates JD. Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues. J Biol Chem. 2016 Apr 22; 291(17):9190-202. PMID: 26940877; PMCID: PMC4861485 [Available on 04/22/17].
    8. Clark IC, Melnyk RA, Youngblut MD, Carlson H, Iavarone AT, Coates JD. Synthetic and Evolutionary Construction of a Chlorate-Reducing Shewanella oneidensis MR-1. MBio. 2015 May 19; 6(3):e00282-15. PMID: 25991681; PMCID: PMC4442138.
    9. Melnyk RA, Youngblut MD, Clark IC, Carlson H, Wetmore KM, Price MN, Iavarone AT, Deutschbauer AM, Arkin AP, Coates JD. Novel mechanism for scavenging of hypochlorite involving a periplasmic methionine-rich Peptide and methionine sulfoxide reductase. MBio. 2015 May 12; 6(3):e00233-15. PMID: 25968643; PMCID: PMC4436054.
    10. Kellenberger CA, Wilson SC, Hickey SF, Gonzalez TL, Su Y, Hallberg ZF, Brewer TF, Iavarone AT, Carlson H, Hsieh YF, Hammond MC. GEMM-I riboswitches from Geobacter sense the bacterial second messenger cyclic AMP-GMP. Proc Natl Acad Sci U S A. 2015 Apr 28; 112(17):5383-8. PMID: 25848022; PMCID: PMC4418906.
    11. Carlson H, Stoeva MK, Justice NB, Sczesnak A, Mullan MR, Mosqueda LA, Kuehl JV, Deutschbauer AM, Arkin AP, Coates JD. Monofluorophosphate is a selective inhibitor of respiratory sulfate-reducing microorganisms. Environ Sci Technol. 2015 Mar 17; 49(6):3727-36. PMID: 25698072.
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    12. Carlson H, Kuehl JV, Hazra AB, Justice NB, Stoeva MK, Sczesnak A, Mullan MR, Iavarone AT, Engelbrektson A, Price MN, Deutschbauer AM, Arkin AP, Coates JD. Mechanisms of direct inhibition of the respiratory sulfate-reduction pathway by (per)chlorate and nitrate. ISME J. 2015 Jun; 9(6):1295-305. PMID: 25405978; PMCID: PMC4438318.
    13. Engelbrektson A, Hubbard CG, Tom LM, Boussina A, Jin YT, Wong H, Piceno YM, Carlson H, Conrad ME, Anderson G, Coates JD. Inhibition of microbial sulfate reduction in a flow-through column system by (per)chlorate treatment. Front Microbiol. 2014; 5:315. PMID: 25071731; PMCID: PMC4092371.
    14. Zhu H, Carlson H, Coates JD. Applicability of anaerobic nitrate-dependent Fe(II) oxidation to microbial enhanced oil recovery (MEOR). Environ Sci Technol. 2013 Aug 06; 47(15):8970-7. PMID: 23799785.
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    15. Carlson H, Iavarone AT, Coates JD. Surfaceomics and surface-enhanced Raman spectroscopy of environmental microbes: matching cofactors with redox-active surface proteins. Proteomics. 2013 Oct; 13(18-19):2761-5. PMID: 23616463.
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    16. Carlson H, Clark IC, Blazewicz SJ, Iavarone AT, Coates JD. Fe(II) oxidation is an innate capability of nitrate-reducing bacteria that involves abiotic and biotic reactions. J Bacteriol. 2013 Jul; 195(14):3260-8. PMID: 23687275; PMCID: PMC3697641.
    17. Carlson H, Clark IC, Melnyk RA, Coates JD. Toward a mechanistic understanding of anaerobic nitrate-dependent iron oxidation: balancing electron uptake and detoxification. Front Microbiol. 2012; 3:57. PMID: 22363331; PMCID: PMC3282478.
    18. Carlson H, Iavarone AT, Gorur A, Yeo BS, Tran R, Melnyk RA, Mathies RA, Auer M, Coates JD. Surface multiheme c-type cytochromes from Thermincola potens and implications for respiratory metal reduction by Gram-positive bacteria. Proc Natl Acad Sci U S A. 2012 Jan 31; 109(5):1702-7. PMID: 22307634; PMCID: PMC3277152.
    19. Melnyk RA, Engelbrektson A, Clark IC, Carlson H, Byrne-Bailey K, Coates JD. Identification of a perchlorate reduction genomic island with novel regulatory and metabolic genes. Appl Environ Microbiol. 2011 Oct; 77(20):7401-4. PMID: 21856823; PMCID: PMC3194888.
    20. Carlson H, Vance RE, Marletta MA. H-NOX regulation of c-di-GMP metabolism and biofilm formation in Legionella pneumophila. Mol Microbiol. 2010 Aug; 77(4):930-42. PMID: 20572940.
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    21. Wang Y, Dufour YS, Carlson H, Donohue TJ, Marletta MA, Ruby EG. H-NOX-mediated nitric oxide sensing modulates symbiotic colonization by Vibrio fischeri. Proc Natl Acad Sci U S A. 2010 May 04; 107(18):8375-80. PMID: 20404170; PMCID: PMC2889544.
    22. Carlson H, Plate L, Price MS, Allen JJ, Shokat KM, Marletta MA. Use of a semisynthetic epitope to probe histidine kinase activity and regulation. Anal Biochem. 2010 Feb 15; 397(2):139-43. PMID: 19819215; PMCID: PMC2812668.
    23. Mohrig JR, Carlson H, Coughlin JM, Hofmeister GE, McMartin LA, Rowley EG, Trimmer EE, Wild AJ, Schultz SC. Novel syn intramolecular pathway in base-catalyzed 1,2-elimination reactions of beta-acetoxy esters. J Org Chem. 2007 Feb 02; 72(3):793-8. PMID: 17253797.
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