Weber, Gunther

TitleComputer Staff Sci/Engr
InstitutionLawrence Berkeley National Lab
DepartmentComputational Research
Address1 Cyclotron Road
Berkeley CA 94720
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Murugesan S, Bouchard K, Chang E, Dougherty M, Hamann B, Weber G. Multi-scale visual analysis of time-varying electrocorticography data via clustering of brain regions. BMC Bioinformatics. 2017 Jun 06; 18(Suppl 6):236. PMID: 28617218.
      View in: PubMed
    2. Murugesan S, Bouchard K, Brown JA, Hamann B, Seeley WW, Trujillo A, Weber G. Brain Modulyzer: Interactive Visual Analysis of Functional Brain Connectivity. IEEE/ACM Trans Comput Biol Bioinform. 2016 May 09. PMID: 28113724.
      View in: PubMed
    3. Oesterling P, Heine C, Weber G, Scheuermann G. Visualizing nD point clouds as topological landscape profiles to guide local data analysis. IEEE Trans Vis Comput Graph. 2013 Mar; 19(3):514-26. PMID: 22566472.
      View in: PubMed
    4. Bremer PT, Weber G, Tierny J, Pascucci V, Day MS, Bell JB. Interactive Exploration and Analysis of Large-Scale Simulations Using Topology-Based Data Segmentation. IEEE Trans Vis Comput Graph. 2011 Sep; 17(9):1307-24. PMID: 21149885.
      View in: PubMed
    5. Childs H, Pugmire D, Ahern S, Whitlock B, Howison M, Weber G, Bethel EW. Extreme scaling of production visualization software on diverse architectures. IEEE Comput Graph Appl. 2010 May-Jun; 30(3):22-31. PMID: 20650715.
      View in: PubMed
    6. Rübel O, Ahern S, Bethel EW, Biggin MD, Childs H, Cormier-Michel E, Depace A, Eisen MB, Fowlkes CC, Geddes CG, Hagen H, Hamann B, Huang MY, Keränen SV, Knowles DW, Hendriks CL, Malik J, Meredith J, Messmer P. Coupling visualization and data analysis for knowledge discovery from multi-dimensional scientific data. Procedia Comput Sci. 2010 May; 1(1):1757-1764. PMID: 23762211.
      View in: PubMed
    7. Bremer PT, Weber G, Pascucci V, Day M, Bell JB. Analyzing and tracking burning structures in lean premixed hydrogen flames. IEEE Trans Vis Comput Graph. 2010 Mar-Apr; 16(2):248-60. PMID: 20075485.
      View in: PubMed
    8. Rübel O, Weber G, Huang MY, Bethel EW, Biggin MD, Fowlkes CC, Luengo Hendriks CL, Keränen SV, Eisen MB, Knowles DW, Malik J, Hagen H, Hamann B. Integrating data clustering and visualization for the analysis of 3D gene expression data. IEEE/ACM Trans Comput Biol Bioinform. 2010 Jan-Mar; 7(1):64-79. PMID: 20150669.
      View in: PubMed
    9. Weber G, Rübel O, Huang MY, DePace AH, Fowlkes CC, Keränen SV, Luengo Hendriks CL, Hagen H, Knowles DW, Malik J, Biggin MD, Hamann B. Visual exploration of three-dimensional gene expression using physical views and linked abstract views. IEEE/ACM Trans Comput Biol Bioinform. 2009 Apr-Jun; 6(2):296-309. PMID: 19407353; PMCID: PMC3045837.
    10. Fowlkes CC, Hendriks CL, Keränen SV, Weber G, Rübel O, Huang MY, Chatoor S, DePace AH, Simirenko L, Henriquez C, Beaton A, Weiszmann R, Celniker S, Hamann B, Knowles DW, Biggin MD, Eisen MB, Malik J. A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm. Cell. 2008 Apr 18; 133(2):364-74. PMID: 18423206.
      View in: PubMed
    11. Weber G, Bremer PT, Pascucci V. Topological landscapes: a terrain metaphor for scientific data. IEEE Trans Vis Comput Graph. 2007 Nov-Dec; 13(6):1416-23. PMID: 17968092.
      View in: PubMed
    12. Staadt OG, Natarajan V, Weber G, Wiley DF, Hamann B. Interactive processing and visualization of image data for biomedical and life science applications. BMC Cell Biol. 2007 Jul 10; 8 Suppl 1:S10. PMID: 17634091; PMCID: PMC1924506.
    13. Weber G, Dillard SE, Carr H, Pascucci V, Hamann B. Topology-controlled volume rendering. IEEE Trans Vis Comput Graph. 2007 Mar-Apr; 13(2):330-41. PMID: 17218749.
      View in: PubMed
    14. Gu S, Anderson I, Kunin V, Cipriano M, Minovitsky S, Weber G, Amenta N, Hamann B, Dubchak I. TreeQ-VISTA: an interactive tree visualization tool with functional annotation query capabilities. Bioinformatics. 2007 Mar 15; 23(6):764-6. PMID: 17234642.
      View in: PubMed
    15. Luengo Hendriks CL, Keränen SV, Fowlkes CC, Simirenko L, Weber G, DePace AH, Henriquez C, Kaszuba DW, Hamann B, Eisen MB, Malik J, Sudar D, Biggin MD, Knowles DW. Three-dimensional morphology and gene expression in the Drosophila blastoderm at cellular resolution I: data acquisition pipeline. Genome Biol. 2006; 7(12):R123. PMID: 17184546; PMCID: PMC1794436.

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