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    Liebschner, Dorothee

    TitleBioinformaticist Project SE
    SchoolLawrence Berkeley National Lab
    DepartmentMolecular Biophys & Integ Bio
    Address1 Cyclotron Road
    Berkeley CA 94720
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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Moriarty NW, Liebschner D, Klei HE, Echols N, Afonine PV, Headd J, Poon BK, Adams PD. Interactive Comparison and Remediation of Collections of Macromolecular Structures. Protein Sci. 2017 Sep 13. PMID: 28901593.
        View in: PubMed
      2. Sato M, Liebschner D, Yamada Y, Matsugaki N, Arakawa T, Wills SS, Hattie M, Stubbs KA, Ito T, Senda T, Ashida H, Fushinobu S. The first crystal structure of a family 129 glycoside hydrolase from a probiotic bacterium reveals critical residues and metal cofactors. J Biol Chem. 2017 Jul 21; 292(29):12126-12138. PMID: 28546425.
        View in: PubMed
      3. Liebschner D, Afonine PV, Moriarty NW, Poon BK, Sobolev OV, Terwilliger TC, Adams PD. Polder maps: improving OMIT maps by excluding bulk solvent. Acta Crystallogr D Struct Biol. 2017 Feb 01; 73(Pt 2):148-157. PMID: 28177311.
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      4. Nagae M, Liebschner D, Yamada Y, Morita-Matsumoto K, Matsugaki N, Senda T, Fujita M, Kinoshita T, Yamaguchi Y. Crystallographic analysis of murine p24?2 Golgi dynamics domain. Proteins. 2017 Apr; 85(4):764-770. PMID: 28066915.
        View in: PubMed
      5. Young ID, Ibrahim M, Chatterjee R, Gul S, Fuller F, Koroidov S, Brewster AS, Tran R, Alonso-Mori R, Kroll T, Michels-Clark T, Laksmono H, Sierra RG, Stan CA, Hussein R, Zhang M, Douthit L, Kubin M, de Lichtenberg C, Long Vo P, Nilsson H, Cheah MH, Shevela D, Saracini C, Bean MA, Seuffert I, Sokaras D, Weng TC, Pastor E, Weninger C, Fransson T, Lassalle L, Bräuer P, Aller P, Docker PT, Andi B, Orville AM, Glownia JM, Nelson S, Sikorski M, Zhu D, Hunter MS, Lane TJ, Aquila A, Koglin JE, Robinson J, Liang M, Boutet S, Lyubimov AY, Uervirojnangkoorn M, Moriarty NW, Liebschner D, Afonine PV, Waterman DG, Evans G, Wernet P, Dobbek H, Weis WI, Brunger AT, Zwart PH, Adams PD, Zouni A, Messinger J, Bergmann U, Sauter NK, Kern J, Yachandra VK, Yano J. Structure of photosystem II and substrate binding at room temperature. Nature. 2016 12 15; 540(7633):453-457. PMID: 27871088.
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      6. Liebschner D, Yamada Y, Matsugaki N, Senda M, Senda T. On the influence of crystal size and wavelength on native SAD phasing. Acta Crystallogr D Struct Biol. 2016 Jun; 72(Pt 6):728-41. PMID: 27303793.
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      7. Liebschner D, Rosenbaum G, Dauter M, Dauter Z. Radiation decay of thaumatin crystals at three X-ray energies. Acta Crystallogr D Biol Crystallogr. 2015 Apr; 71(Pt 4):772-8. PMID: 25849388; PMCID: PMC4388262.
      8. Elias M, Liebschner D, Koepke J, Lecomte C, Guillot B, Jelsch C, Chabriere E. Hydrogen atoms in protein structures: high-resolution X-ray diffraction structure of the DFPase. BMC Res Notes. 2013 Aug 02; 6:308. PMID: 23915572; PMCID: PMC3737025.
      9. Liebschner D, Dauter M, Brzuszkiewicz A, Dauter Z. On the reproducibility of protein crystal structures: five atomic resolution structures of trypsin. Acta Crystallogr D Biol Crystallogr. 2013 Aug; 69(Pt 8):1447-62. PMID: 23897468; PMCID: PMC3727327.
      10. Liebschner D, Brzezinski K, Dauter M, Dauter Z, Nowak M, Kur J, Olszewski M. Dimeric structure of the N-terminal domain of PriB protein from Thermoanaerobacter tengcongensis solved ab initio. Acta Crystallogr D Biol Crystallogr. 2012 Dec; 68(Pt 12):1680-9. PMID: 23151633; PMCID: PMC3498933.
      11. Liebschner D, Dauter M, Rosenbaum G, Dauter Z. How good can our beamlines be? Acta Crystallogr D Biol Crystallogr. 2012 Oct; 68(Pt 10):1430-6. PMID: 22993097; PMCID: PMC3447404.
      12. Domagala S, Fournier B, Liebschner D, Guillot B, Jelsch C. An improved experimental databank of transferable multipolar atom models--ELMAM2. Construction details and applications. Acta Crystallogr A. 2012 May; 68(Pt 3):337-51. PMID: 22514066.
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      13. Liebschner D, Jelsch C, Espinosa E, Lecomte C, Chabrière E, Guillot B. Topological analysis of hydrogen bonds and weak interactions in protein helices via transferred experimental charge density parameters. J Phys Chem A. 2011 Nov 17; 115(45):12895-904. PMID: 21805997.
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      14. Elias M, Liebschner D, Gotthard G, Chabriere E. Structural insights and ab initio sequencing within the DING proteins family. J Synchrotron Radiat. 2011 Jan; 18(1):45-9. PMID: 21169690; PMCID: PMC3004253.
      15. Liebschner D, Elias M, Moniot S, Fournier B, Scott K, Jelsch C, Guillot B, Lecomte C, Chabrière E. Elucidation of the phosphate binding mode of DING proteins revealed by subangstrom X-ray crystallography. J Am Chem Soc. 2009 Jun 10; 131(22):7879-86. PMID: 19445459.
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