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Doud, Devin

TitleComputational Bio PD Fellow
InstitutionLawrence Berkeley National Lab
DepartmentJoint Genome Institute
Address1 Cyclotron Road
Berkeley CA 94720
Phone925/296-5853
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C, Lapidus A, Meyer F, Yilmaz P, Parks DH, Eren AM, Schriml L, Banfield JF, Hugenholtz P, Woyke T. Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nat Biotechnol. 2018 Feb 06; 36(2):196. PMID: 29406516.
      View in: PubMed
    2. Woyke T, Doud D, Schulz F. The trajectory of microbial single-cell sequencing. Nat Methods. 2017 Oct 31; 14(11):1045-1054. PMID: 29088131.
      View in: PubMed
    3. Bowers RM, Kyrpides NC, Stepanauskas R, Harmon-Smith M, Doud D, Reddy TBK, Schulz F, Jarett J, Rivers AR, Eloe-Fadrosh EA, Tringe SG, Ivanova NN, Copeland A, Clum A, Becraft ED, Malmstrom RR, Birren B, Podar M, Bork P, Weinstock GM, Garrity GM, Dodsworth JA, Yooseph S, Sutton G, Glöckner FO, Gilbert JA, Nelson WC, Hallam SJ, Jungbluth SP, Ettema TJG, Tighe S, Konstantinidis KT, Liu WT, Baker BJ, Rattei T, Eisen JA, Hedlund B, McMahon KD, Fierer N, Knight R, Finn R, Cochrane G, Karsch-Mizrachi I, Tyson GW, Rinke C. Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nat Biotechnol. 2017 Aug 08; 35(8):725-731. PMID: 28787424.
      View in: PubMed
    4. Doud D, Holmes EC, Richter H, Molitor B, Jander G, Angenent LT. Metabolic engineering of Rhodopseudomonas palustris for the obligate reduction of n-butyrate to n-butanol. Biotechnol Biofuels. 2017; 10:178. PMID: 28702083.
      View in: PubMed
    5. Doud D, Woyke T. Novel approaches in function-driven single-cell genomics. FEMS Microbiol Rev. 2017 07 01; 41(4):538-548. PMID: 28591840.
      View in: PubMed
    6. Doud D, Angenent LT. Single-Genotype Syntrophy by Rhodopseudomonas palustris Is Not a Strategy to Aid Redox Balance during Anaerobic Degradation of Lignin Monomers. Front Microbiol. 2016; 7:1082. PMID: 27471497; PMCID: PMC4943940.
    7. Jain A, Voulis N, Jung EE, Doud D, Miller WB, Angenent LT, Erickson D. Optimal intensity and biomass density for biofuel production in a thin-light-path photobioreactor. Environ Sci Technol. 2015 May 19; 49(10):6327-34. PMID: 25910004.
      View in: PubMed
    8. Doud D, Jain A, Ahsan SS, Erickson D, Angenent LT. In situ UV disinfection of a waveguide-based photobioreactor. Environ Sci Technol. 2014 Oct 07; 48(19):11521-6. PMID: 25184790.
      View in: PubMed
    9. Jung EE, Jain A, Voulis N, Doud D, Angenent LT, Erickson D. Stacked optical waveguide photobioreactor for high density algal cultures. Bioresour Technol. 2014 Nov; 171:495-9. PMID: 25219787.
      View in: PubMed
    10. Webster DP, TerAvest MA, Doud D, Chakravorty A, Holmes EC, Radens CM, Sureka S, Gralnick JA, Angenent LT. An arsenic-specific biosensor with genetically engineered Shewanella oneidensis in a bioelectrochemical system. Biosens Bioelectron. 2014 Dec 15; 62:320-4. PMID: 25038536.
      View in: PubMed
    11. Jung EE, Kalontarov M, Doud D, Ooms MD, Angenent LT, Sinton D, Erickson D. Slab waveguide photobioreactors for microalgae based biofuel production. Lab Chip. 2012 Oct 07; 12(19):3740-5. PMID: 22824859.
      View in: PubMed
    12. Hewson I, Brown JM, Gitlin SA, Doud D. Nucleopolyhedrovirus detection and distribution in terrestrial, freshwater, and marine habitats of Appledore Island, Gulf of Maine. Microb Ecol. 2011 Jul; 62(1):48-57. PMID: 21509607.
      View in: PubMed
    13. Rosario-Ortiz FL, Mezyk SP, Doud D, Snyder SA. Quantitative correlation of absolute hydroxyl radical rate constants with non-isolated effluent organic matter bulk properties in water. Environ Sci Technol. 2008 Aug 15; 42(16):5924-30. PMID: 18767646.
      View in: PubMed

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