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    Udwary, Daniel

    TitleComputer Systems Engineer 3
    SchoolLawrence Berkeley National Lab
    DepartmentNERSC
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone510/486-6375
    vCardDownload vCard

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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Wang Q, Arighi CN, King BL, Polson SW, Vincent J, Chen C, Huang H, Kingham BF, Page ST, Rendino MF, Thomas WK, Udwary D, Wu CH. Community annotation and bioinformatics workforce development in concert--Little Skate Genome Annotation Workshops and Jamborees. Database (Oxford). 2012; 2012:bar064. PMID: 22434832; PMCID: PMC3308154.
      2. Udwary D, Gontang EA, Jones AC, Jones CS, Schultz AW, Winter JM, Yang JY, Beauchemin N, Capson TL, Clark BR, Esquenazi E, Eustáquio AS, Freel K, Gerwick L, Gerwick WH, Gonzalez D, Liu WT, Malloy KL, Maloney KN, Nett M, Nunnery JK, Penn K, Prieto-Davo A, Simmons TL, Weitz S, Wilson MC, Tisa LS, Dorrestein PC, Moore BS. Significant natural product biosynthetic potential of actinorhizal symbionts of the genus frankia, as revealed by comparative genomic and proteomic analyses. Appl Environ Microbiol. 2011 Jun; 77(11):3617-25. PMID: 21498757; PMCID: PMC3127629.
      3. Penn K, Jenkins C, Nett M, Udwary D, Gontang EA, McGlinchey RP, Foster B, Lapidus A, Podell S, Allen EE, Moore BS, Jensen PR. Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria. ISME J. 2009 Oct; 3(10):1193-203. PMID: 19474814; PMCID: PMC2749086.
      4. Crawford JM, Vagstad AL, Ehrlich KC, Udwary D, Townsend CA. Acyl-carrier protein-phosphopantetheinyltransferase partnerships in fungal fatty acid synthases. Chembiochem. 2008 Jul 02; 9(10):1559-63. PMID: 18551496; PMCID: PMC3189688.
      5. Schultz AW, Oh DC, Carney JR, Williamson RT, Udwary D, Jensen PR, Gould SJ, Fenical W, Moore BS. Biosynthesis and structures of cyclomarins and cyclomarazines, prenylated cyclic peptides of marine actinobacterial origin. J Am Chem Soc. 2008 Apr 02; 130(13):4507-16. PMID: 18331040.
        View in: PubMed
      6. Udwary D, Zeigler L, Asolkar RN, Singan V, Lapidus A, Fenical W, Jensen PR, Moore BS. Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica. Proc Natl Acad Sci U S A. 2007 Jun 19; 104(25):10376-81. PMID: 17563368; PMCID: PMC1965521.
      7. Song L, Barona-Gomez F, Corre C, Xiang L, Udwary D, Austin MB, Noel JP, Moore BS, Challis GL. Type III polyketide synthase beta-ketoacyl-ACP starter unit and ethylmalonyl-CoA extender unit selectivity discovered by Streptomyces coelicolor genome mining. J Am Chem Soc. 2006 Nov 22; 128(46):14754-5. PMID: 17105255; PMCID: PMC2859292.
      8. Crawford JM, Dancy BC, Hill EA, Udwary D, Townsend CA. Identification of a starter unit acyl-carrier protein transacylase domain in an iterative type I polyketide synthase. Proc Natl Acad Sci U S A. 2006 Nov 07; 103(45):16728-33. PMID: 17071746; PMCID: PMC1636523.
      9. Austin MB, Izumikawa M, Bowman ME, Udwary D, Ferrer JL, Moore BS, Noel JP. Crystal structure of a bacterial type III polyketide synthase and enzymatic control of reactive polyketide intermediates. J Biol Chem. 2004 Oct 22; 279(43):45162-74. PMID: 15265863.
        View in: PubMed
      10. Udwary D, Merski M, Townsend CA. A method for prediction of the locations of linker regions within large multifunctional proteins, and application to a type I polyketide synthase. J Mol Biol. 2002 Oct 25; 323(3):585-98. PMID: 12381311; PMCID: PMC3400148.
      11. Udwary D, Casillas LK, Townsend CA. Synthesis of 11-hydroxyl O-methylsterigmatocystin and the role of a cytochrome P-450 in the final step of aflatoxin biosynthesis. J Am Chem Soc. 2002 May 15; 124(19):5294-303. PMID: 11996570.
        View in: PubMed
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