Loading...

Snijders, Antoine

TitleBiologist Research Sci/Engr
InstitutionLawrence Berkeley National Lab
DepartmentBiological Systems & Eng
Address1 Cyclotron Road
Berkeley CA 94720
Phone510/486-7235
vCardDownload vCard

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
    List All   |   Timeline
    1. Xiao Y, Yin C, Wang Y, Lv H, Wang W, Huang Y, Perez-Losada J, Snijders A, Mao JH, Zhang P. FBXW7 deletion contributes to lung tumor development and confers resistance to gefitinib therapy. Mol Oncol. 2018 Apr 06. PMID: 29633504.
      View in: PubMed
    2. Hang B, Wang Y, Huang Y, Wang P, Langley SA, Bi L, Sarker AH, Schick SF, Havel C, Jacob P, Benowitz N, Destaillats H, Tang X, Xia Y, Jen KY, Gundel LA, Mao JH, Snijders A. Short-term early exposure to thirdhand cigarette smoke increases lung cancer incidence in mice. Clin Sci (Lond). 2018 Feb 28; 132(4):475-488. PMID: 29440622.
      View in: PubMed
    3. Chen Y, Mao P, Snijders A, Wang D. Senescence chips for ultrahigh-throughput isolation and removal of senescent cells. Aging Cell. 2018 Apr; 17(2). PMID: 29336105.
      View in: PubMed
    4. Chen EG, Wang P, Lou H, Wang Y, Yan H, Bi L, Liu L, Li B, Snijders A, Mao JH, Hang B. A robust gene expression-based prognostic risk score predicts overall survival of lung adenocarcinoma patients. Oncotarget. 2018 Jan 23; 9(6):6862-6871. PMID: 29467935.
      View in: PubMed
    5. Mao JH, Diest PJV, Perez-Losada J, Snijders A. Revisiting the impact of age and molecular subtype on overall survival after radiotherapy in breast cancer patients. Sci Rep. 2017 Oct 03; 7(1):12587. PMID: 28974723.
      View in: PubMed
    6. Turker MS, Grygoryev D, Lasarev M, Ohlrich A, Rwatambuga FA, Johnson S, Dan C, Eckelmann B, Hryciw G, Mao JH, Snijders A, Gauny S, Kronenberg A. Simulated space radiation-induced mutants in the mouse kidney display widespread genomic change. PLoS One. 2017; 12(7):e0180412. PMID: 28683078.
      View in: PubMed
    7. Hang B, Wang P, Zhao Y, Sarker A, Chenna A, Xia Y, Snijders A, Mao JH. Adverse Health Effects of Thirdhand Smoke: From Cell to Animal Models. Int J Mol Sci. 2017 Apr 28; 18(5). PMID: 28452951.
      View in: PubMed
    8. Yan H, Bi L, Wang Y, Zhang X, Hou Z, Wang Q, Snijders A, Mao JH. Integrative analysis of multi-omics data reveals distinct impacts of DDB1-CUL4 associated factors in human lung adenocarcinomas. Sci Rep. 2017 03 23; 7(1):333. PMID: 28336923.
      View in: PubMed
    9. Mao XY, Lee MJ, Zhu J, Zhu C, Law SM, Snijders A. Genome-wide screen identifies a novel prognostic signature for breast cancer survival. Oncotarget. 2017 Feb 21; 8(8):14003-14016. PMID: 28122328.
      View in: PubMed
    10. Hang B, Snijders A, Huang Y, Schick SF, Wang P, Xia Y, Havel C, Jacob P, Benowitz N, Destaillats H, Gundel LA, Mao JH. Early exposure to thirdhand cigarette smoke affects body mass and the development of immunity in mice. Sci Rep. 2017 Feb 03; 7:41915. PMID: 28157226.
      View in: PubMed
    11. Chang H, Han J, Zhong C, Snijders A, Mao JH. Unsupervised Transfer Learning via Multi-Scale Convolutional Sparse Coding for Biomedical Applications. IEEE Trans Pattern Anal Mach Intell. 2018 May; 40(5):1182-1194. PMID: 28129148.
      View in: PubMed
    12. Snijders A, Lee SY, Hang B, Hao W, Bissell MJ, Mao JH. FAM83 family oncogenes are broadly involved in human cancers: an integrative multi-omics approach. Mol Oncol. 2017 Feb; 11(2):167-179. PMID: 28078827.
      View in: PubMed
    13. Snijders A, Mao JH. Multi-omics approach to infer cancer therapeutic targets on chromosome 20q across tumor types. Adv Mod Oncol Res. 2016; 2(4):215-223. PMID: 27642640.
      View in: PubMed
    14. Sridharan DM, Asaithamby A, Blattnig SR, Costes SV, Doetsch PW, Dynan WS, Hahnfeldt P, Hlatky L, Kidane Y, Kronenberg A, Naidu MD, Peterson LE, Plante I, Ponomarev AL, Saha J, Snijders A, Srinivasan K, Tang J, Werner E, Pluth JM. Evaluating biomarkers to model cancer risk post cosmic ray exposure. Life Sci Space Res (Amst). 2016 Jun; 9:19-47. PMID: 27345199.
      View in: PubMed
    15. Snijders A, Mao JH. Co-Expression Network Analysis of Fbxw7-Associated LncRNAs Reveals Their Functions in Radiation-Induced Thymic Lymphoma. Insights Cancer Res. 2016; 1:1-5. PMID: 27376155.
      View in: PubMed
    16. Snijders A, Liu Y, Su L, Huang Y, Mao JH. Expression profiling reveals transcriptional regulation by Fbxw7/mTOR pathway in radiation-induced mouse thymic lymphomas. Oncotarget. 2015 Dec 29; 6(42):44794-805. PMID: 26575021; PMCID: PMC4792592.
    17. Mao JH, Langley SA, Huang Y, Hang M, Bouchard KE, Celniker SE, Brown JB, Jansson JK, Karpen GH, Snijders A. Identification of genetic factors that modify motor performance and body weight using Collaborative Cross mice. Sci Rep. 2015 Nov 09; 5:16247. PMID: 26548763; PMCID: PMC4637864.
    18. Mao JH, Snijders A. Low-dose radiation cancer susceptibility models. Aging (Albany NY). 2015 Jun; 7(6):352-3. PMID: 26143074; PMCID: PMC4505158.
    19. Zhang P, Lo A, Huang Y, Huang G, Liang G, Mott J, Karpen GH, Blakely EA, Bissell MJ, Barcellos-Hoff MH, Snijders A, Mao JH. Identification of genetic loci that control mammary tumor susceptibility through the host microenvironment. Sci Rep. 2015 Mar 09; 5:8919. PMID: 25747469; PMCID: PMC4352890.
    20. Tang J, Huang Y, Nguyen DH, Costes SV, Snijders A, Mao JH. Genetic Background Modulates lncRNA-Coordinated Tissue Response to Low Dose Ionizing Radiation. Int J Genomics. 2015; 2015:461038. PMID: 25802832; PMCID: PMC4353441.
    21. Hang M, Huang Y, Snijders A, Mao JH. Genetic background influences loss of heterozygosity patterns in radiation-induced mouse thymic lymphoma. J Nat Sci. 2015; 1(5):e96. PMID: 25932465.
      View in: PubMed
    22. Snijders A, Mannion BJ, Leung SG, Moon SC, Kronenberg A, Wiese C. Micronucleus formation in human keratinocytes is dependent on radiation quality and tissue architecture. Environ Mol Mutagen. 2015 Jan; 56(1):22-31. PMID: 25041929.
      View in: PubMed
    23. Snijders A, Langley S, Mao JH, Bhatnagar S, Bjornstad KA, Rosen CJ, Lo A, Huang Y, Blakely EA, Karpen GH, Bissell MJ, Wyrobek AJ. An interferon signature identified by RNA-sequencing of mammary tissues varies across the estrous cycle and is predictive of metastasis-free survival. Oncotarget. 2014 Jun 30; 5(12):4011-25. PMID: 24994117; PMCID: PMC4147302.
    24. Kim D, Marchetti F, Chen Z, Zaric S, Wilson RJ, Hall DA, Gaster RS, Lee JR, Wang J, Osterfeld SJ, Yu H, White RM, Blakely WF, Peterson LE, Bhatnagar S, Mannion B, Tseng S, Roth K, Coleman M, Snijders A, Wyrobek AJ, Wang SX. Nanosensor dosimetry of mouse blood proteins after exposure to ionizing radiation. Sci Rep. 2013; 3:2234. PMID: 23868657; PMCID: PMC3715761.
    25. Budworth H, Snijders A, Marchetti F, Mannion B, Bhatnagar S, Kwoh E, Tan Y, Wang SX, Blakely WF, Coleman M, Peterson L, Wyrobek AJ. DNA repair and cell cycle biomarkers of radiation exposure and inflammation stress in human blood. PLoS One. 2012; 7(11):e48619. PMID: 23144912; PMCID: PMC3492462.
    26. Snijders A, Marchetti F, Bhatnagar S, Duru N, Han J, Hu Z, Mao JH, Gray JW, Wyrobek AJ. Genetic differences in transcript responses to low-dose ionizing radiation identify tissue functions associated with breast cancer susceptibility. PLoS One. 2012; 7(10):e45394. PMID: 23077491; PMCID: PMC3471924.
    27. Bhattacharya A, Roy R, Snijders A, Hamilton G, Paquette J, Tokuyasu T, Bengtsson H, Jordan RC, Olshen AB, Pinkel D, Schmidt BL, Albertson DG. Two distinct routes to oral cancer differing in genome instability and risk for cervical node metastasis. Clin Cancer Res. 2011 Nov 15; 17(22):7024-34. PMID: 22068658; PMCID: PMC3226754.
    28. Nowee ME, Seeber LM, Horrée N, Snijders A, Van Diest PJ, Verheijen RH, Dorsman JC. Array comparative genomic hybridization analysis indicates that serous carcinomas of the ovary, fallopian tube and endometrium are distinct entities. Histopathology. 2010 Oct; 57(4):634-7. PMID: 20955390.
      View in: PubMed
    29. Kuijper A, Snijders A, Berns EM, Kuenen-Boumeester V, van der Wall E, Albertson DG, van Diest PJ. Genomic profiling by array comparative genomic hybridization reveals novel DNA copy number changes in breast phyllodes tumours. Cell Oncol. 2009; 31(1):31-9. PMID: 19096148; PMCID: PMC4618888.
    30. Snijders A, Hermsen MA, Baughman J, Buffart TE, Huey B, Gajduskova P, Roydasgupta R, Tokuyasu T, Meijer GA, Fridlyand J, Albertson DG. Acquired genomic aberrations associated with methotrexate resistance vary with background genomic instability. Genes Chromosomes Cancer. 2008 Jan; 47(1):71-83. PMID: 17943968.
      View in: PubMed
    31. Byrd KN, Huey B, Roydasgupta R, Fridlyand J, Snijders A, Albertson DG. FBXW7 and DNA copy number instability. Breast Cancer Res Treat. 2008 May; 109(1):47-54. PMID: 17588203.
      View in: PubMed
    32. Gajduskova P, Snijders A, Kwek S, Roydasgupta R, Fridlyand J, Tokuyasu T, Pinkel D, Albertson DG. Genome position and gene amplification. Genome Biol. 2007; 8(6):R120. PMID: 17584934; PMCID: PMC2394771.
    33. Trautmann K, Terdiman JP, French AJ, Roydasgupta R, Sein N, Kakar S, Fridlyand J, Snijders A, Albertson DG, Thibodeau SN, Waldman FM. Chromosomal instability in microsatellite-unstable and stable colon cancer. Clin Cancer Res. 2006 Nov 01; 12(21):6379-85. PMID: 17085649.
      View in: PubMed
    34. Fridlyand J, Snijders A, Ylstra B, Li H, Olshen A, Segraves R, Dairkee S, Tokuyasu T, Ljung BM, Jain AN, McLennan J, Ziegler J, Chin K, Devries S, Feiler H, Gray JW, Waldman F, Pinkel D, Albertson DG. Breast tumor copy number aberration phenotypes and genomic instability. BMC Cancer. 2006 Apr 18; 6:96. PMID: 16620391; PMCID: PMC1459181.
    35. Albertson DG, Snijders A, Fridlyand J, Jordan R, Pinkel D, Schmidt BL. Genomic analysis of tumors by array comparative genomic hybridization: more is better. Cancer Res. 2006 Apr 01; 66(7):3955-6; author reply 3956. PMID: 16585227.
      View in: PubMed
    36. Nowak NJ, Snijders A, Conroy JM, Albertson DG. The BAC resource: tools for array CGH and FISH. Curr Protoc Hum Genet. 2005 Aug; Chapter 4:Unit 4.13. PMID: 18428377.
      View in: PubMed
    37. Snijders A, Schmidt BL, Fridlyand J, Dekker N, Pinkel D, Jordan RC, Albertson DG. Rare amplicons implicate frequent deregulation of cell fate specification pathways in oral squamous cell carcinoma. Oncogene. 2005 Jun 16; 24(26):4232-42. PMID: 15824737.
      View in: PubMed
    38. Hermsen M, Snijders A, Guervós MA, Taenzer S, Koerner U, Baak J, Pinkel D, Albertson D, van Diest P, Meijer G, Schrock E. Centromeric chromosomal translocations show tissue-specific differences between squamous cell carcinomas and adenocarcinomas. Oncogene. 2005 Feb 24; 24(9):1571-9. PMID: 15674345.
      View in: PubMed
    39. Snijders A, Nowak NJ, Huey B, Fridlyand J, Law S, Conroy J, Tokuyasu T, Demir K, Chiu R, Mao JH, Jain AN, Jones SJ, Balmain A, Pinkel D, Albertson DG. Mapping segmental and sequence variations among laboratory mice using BAC array CGH. Genome Res. 2005 Feb; 15(2):302-11. PMID: 15687294; PMCID: PMC546532.
    40. Zhang X, Snijders A, Segraves R, Zhang X, Niebuhr A, Albertson D, Yang H, Gray J, Niebuhr E, Bolund L, Pinkel D. High-resolution mapping of genotype-phenotype relationships in cri du chat syndrome using array comparative genomic hybridization. Am J Hum Genet. 2005 Feb; 76(2):312-26. PMID: 15635506; PMCID: PMC1196376.
    41. Ishkanian AS, Malloff CA, Watson SK, DeLeeuw RJ, Chi B, Coe BP, Snijders A, Albertson DG, Pinkel D, Marra MA, Ling V, MacAulay C, Lam WL. A tiling resolution DNA microarray with complete coverage of the human genome. Nat Genet. 2004 Mar; 36(3):299-303. PMID: 14981516.
      View in: PubMed
    42. Weiss MM, Kuipers EJ, Postma C, Snijders A, Pinkel D, Meuwissen SG, Albertson D, Meijer GA. Genomic alterations in primary gastric adenocarcinomas correlate with clinicopathological characteristics and survival. Cell Oncol. 2004; 26(5-6):307-17. PMID: 15623941; PMCID: PMC4611111.
    43. Snijders A, Segraves R, Blackwood S, Pinkel D, Albertson DG. BAC microarray-based comparative genomic hybridization. Methods Mol Biol. 2004; 256:39-56. PMID: 15024158.
      View in: PubMed
    44. Snijders A, Fridlyand J, Mans DA, Segraves R, Jain AN, Pinkel D, Albertson DG. Shaping of tumor and drug-resistant genomes by instability and selection. Oncogene. 2003 Jul 10; 22(28):4370-9. PMID: 12853973.
      View in: PubMed
    45. Snijders A, Nowee ME, Fridlyand J, Piek JM, Dorsman JC, Jain AN, Pinkel D, van Diest PJ, Verheijen RH, Albertson DG. Genome-wide-array-based comparative genomic hybridization reveals genetic homogeneity and frequent copy number increases encompassing CCNE1 in fallopian tube carcinoma. Oncogene. 2003 Jul 03; 22(27):4281-6. PMID: 12833150.
      View in: PubMed
    46. Weiss MM, Snijders A, Kuipers EJ, Ylstra B, Pinkel D, Meuwissen SG, van Diest PJ, Albertson DG, Meijer GA. Determination of amplicon boundaries at 20q13.2 in tissue samples of human gastric adenocarcinomas by high-resolution microarray comparative genomic hybridization. J Pathol. 2003 Jul; 200(3):320-6. PMID: 12845628.
      View in: PubMed
    47. Snijders A, Pinkel D, Albertson DG. Current status and future prospects of array-based comparative genomic hybridisation. Brief Funct Genomic Proteomic. 2003 Apr; 2(1):37-45. PMID: 15239942.
      View in: PubMed
    48. Weiss MM, Kuipers EJ, Postma C, Snijders A, Siccama I, Pinkel D, Westerga J, Meuwissen SG, Albertson DG, Meijer GA. Genomic profiling of gastric cancer predicts lymph node status and survival. Oncogene. 2003 Mar 27; 22(12):1872-9. PMID: 12660823.
      View in: PubMed
    49. Jain AN, Tokuyasu TA, Snijders A, Segraves R, Albertson DG, Pinkel D. Fully automatic quantification of microarray image data. Genome Res. 2002 Feb; 12(2):325-32. PMID: 11827952; PMCID: PMC155276.

    This site is running Profiles RNS version v2.10.1-548-g4cb907d4 on PROFILES-PWEB02.