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    22833 Publications
    3073 Total Profiles
    24 Edited Profiles

    Piceno, Yvette

    TitleResearch Assoc Staff
    SchoolLawrence Berkeley National Lab
    DepartmentEarth Sciences
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone510/486-4498

       Bibliographic 
       Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can sign in to make corrections and additions, or contact us for help.
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      1. Moissl-Eichinger C, Auerbach AK, Probst AJ, Mahnert A, Tom L, Piceno Y, Andersen GL, Venkateswaran K, Rettberg P, Barczyk S, Pukall R, Berg G. Quo vadis? Microbial profiling revealed strong effects of cleanroom maintenance and routes of contamination in indoor environments. Sci Rep. 2015; 5:9156.
        View in: PubMed
      2. Priester JH, Van De Werfhorst LC, Ge Y, Adeleye AS, Tomar S, Tom LM, Piceno YM, Andersen GL, Holden PA. Effects of TiO2 and Ag Nanoparticles on Polyhydroxybutyrate Biosynthesis By Activated Sludge Bacteria. Environ Sci Technol. 2014 Dec 16; 48(24):14712-20.
        View in: PubMed
      3. Kellogg CA, Piceno YM, Tom LM, DeSantis TZ, Gray MA, Andersen GL. Comparing Bacterial Community Composition of Healthy and Dark Spot-Affected Siderastrea siderea in Florida and the Caribbean. PLoS One. 2014; 9(10):e108767.
        View in: PubMed
      4. Piceno YM, Reid FC, Tom LM, Conrad ME, Bill M, Hubbard CG, Fouke BW, Graff CJ, Han J, Stringfellow WT, Hanlon JS, Hu P, Hazen TC, Andersen GL. Temperature and injection water source influence microbial community structure in four Alaskan North Slope hydrocarbon reservoirs. Front Microbiol. 2014; 5:409.
        View in: PubMed
      5. Engelbrektson A, Hubbard CG, Tom LM, Boussina A, Jin YT, Wong H, Piceno YM, Carlson HK, Conrad ME, Anderson G, Coates JD. Inhibition of microbial sulfate reduction in a flow-through column system by (per)chlorate treatment. Front Microbiol. 2014; 5:315.
        View in: PubMed
      6. Closek CJ, Sunagawa S, DeSalvo MK, Piceno YM, DeSantis TZ, Brodie EL, Weber MX, Voolstra CR, Andersen GL, Medina M. Coral transcriptome and bacterial community profiles reveal distinct Yellow Band Disease states in Orbicella faveolata. ISME J. 2014 Dec; 8(12):2411-22.
        View in: PubMed
      7. Wong J, Piceno YM, Desantis TZ, Pahl M, Andersen GL, Vaziri ND. Expansion of Urease- and Uricase-Containing, Indole- and p-Cresol-Forming and Contraction of Short-Chain Fatty Acid-Producing Intestinal Microbiota in ESRD. Am J Nephrol. 2014; 39(3):230-7.
        View in: PubMed
      8. Wells GF, Wu CH, Piceno YM, Eggleston B, Brodie EL, Desantis TZ, Andersen GL, Hazen TC, Francis CA, Criddle CS. Microbial biogeography across a full-scale wastewater treatment plant transect: evidence for immigration between coupled processes. Appl Microbiol Biotechnol. 2014 May; 98(10):4723-36.
        View in: PubMed
      9. Kellogg CA, Piceno YM, Tom LM, Desantis TZ, Gray MA, Zawada DG, Andersen GL. Comparing Bacterial Community Composition between Healthy and White Plague-Like Disease States in Orbicella annularis Using PhyloChip™ G3 Microarrays. PLoS One. 2013; 8(11):e79801.
        View in: PubMed
      10. Zhang R, Wu Q, Piceno YM, Desantis TZ, Saunders FM, Andersen GL, Liu WT. Diversity of bacterioplankton in contrasting Tibetan lakes revealed by high-density microarray and clone library analysis. FEMS Microbiol Ecol. 2013 Nov; 86(2):277-87.
        View in: PubMed
      11. Mello A, Ding GC, Piceno YM, Napoli C, Tom LM, DeSantis TZ, Andersen GL, Smalla K, Bonfante P. Truffle brûlés have an impact on the diversity of soil bacterial communities. PLoS One. 2013; 8(4):e61945.
        View in: PubMed
      12. Ding GC, Piceno YM, Heuer H, Weinert N, Dohrmann AB, Carrillo A, Andersen GL, Castellanos T, Tebbe CC, Smalla K. Changes of soil bacterial diversity as a consequence of agricultural land use in a semi-arid ecosystem. PLoS One. 2013; 8(3):e59497.
        View in: PubMed
      13. Lau SC, Zhang R, Brodie EL, Piceno YM, Andersen G, Liu WT. Biogeography of bacterioplankton in the tropical seawaters of Singapore. FEMS Microbiol Ecol. 2013 May; 84(2):259-69.
        View in: PubMed
      14. Probst AJ, Holman HY, DeSantis TZ, Andersen GL, Birarda G, Bechtel HA, Piceno YM, Sonnleitner M, Venkateswaran K, Moissl-Eichinger C. Tackling the minority: sulfate-reducing bacteria in an archaea-dominated subsurface biofilm. ISME J. 2013 Mar; 7(3):635-51.
        View in: PubMed
      15. Hayden HL, Mele PM, Bougoure DS, Allan CY, Norng S, Piceno YM, Brodie EL, Desantis TZ, Andersen GL, Williams AL, Hovenden MJ. Changes in the microbial community structure of bacteria, archaea and fungi in response to elevated CO(2) and warming in an Australian native grassland soil. Environ Microbiol. 2012 Dec; 14(12):3081-96.
        View in: PubMed
      16. Vaziri ND, Wong J, Pahl M, Piceno YM, Yuan J, DeSantis TZ, Ni Z, Nguyen TH, Andersen GL. Chronic kidney disease alters intestinal microbial flora. Kidney Int. 2013 Feb; 83(2):308-15.
        View in: PubMed
      17. Beazley MJ, Martinez RJ, Rajan S, Powell J, Piceno YM, Tom LM, Andersen GL, Hazen TC, Van Nostrand JD, Zhou J, Mortazavi B, Sobecky PA. Microbial community analysis of a coastal salt marsh affected by the Deepwater Horizon oil spill. PLoS One. 2012; 7(7):e41305.
        View in: PubMed
      18. Korves TM, Piceno YM, Tom LM, Desantis TZ, Jones BW, Andersen GL, Hwang GM. Bacterial communities in commercial aircraft high-efficiency particulate air (HEPA) filters assessed by PhyloChip analysis. Indoor Air. 2013 Feb; 23(1):50-61.
        View in: PubMed
      19. Reith F, Brugger J, Zammit CM, Gregg AL, Goldfarb KC, Andersen GL, DeSantis TZ, Piceno YM, Brodie EL, Lu Z, He Z, Zhou J, Wakelin SA. Influence of geogenic factors on microbial communities in metallogenic Australian soils. ISME J. 2012 Nov; 6(11):2107-18.
        View in: PubMed
      20. Handley KM, Wrighton KC, Piceno YM, Andersen GL, DeSantis TZ, Williams KH, Wilkins MJ, N'Guessan AL, Peacock A, Bargar J, Long PE, Banfield JF. High-density PhyloChip profiling of stimulated aquifer microbial communities reveals a complex response to acetate amendment. FEMS Microbiol Ecol. 2012 Jul; 81(1):188-204.
        View in: PubMed
      21. De Jesús-Laboy KM, Godoy-Vitorino F, Piceno YM, Tom LM, Pantoja-Feliciano IG, Rivera-Rivera MJ, Andersen GL, Domínguez-Bello MG. Comparison of the fecal microbiota in feral and domestic goats. Genes (Basel). 2011; 3(1):1-18.
        View in: PubMed
      22. García-Amado MA, Godoy-Vitorino F, Piceno YM, Tom LM, Andersen GL, Herrera EA, Domínguez-Bello MG. Bacterial diversity in the cecum of the world's largest living rodent (Hydrochoerus hydrochaeris). Microb Ecol. 2012 May; 63(4):719-25.
        View in: PubMed
      23. Kellogg CA, Piceno YM, Tom LM, DeSantis TZ, Zawada DG, Andersen GL. PhyloChip™ microarray comparison of sampling methods used for coral microbial ecology. J Microbiol Methods. 2012 Jan; 88(1):103-9.
        View in: PubMed
      24. Wakelin SA, Anand RR, Reith F, Gregg AL, Noble RR, Goldfarb KC, Andersen GL, DeSantis TZ, Piceno YM, Brodie EL. Bacterial communities associated with a mineral weathering profile at a sulphidic mine tailings dump in arid Western Australia. FEMS Microbiol Ecol. 2012 Feb; 79(2):298-311.
        View in: PubMed
      25. He Z, Piceno Y, Deng Y, Xu M, Lu Z, Desantis T, Andersen G, Hobbie SE, Reich PB, Zhou J. The phylogenetic composition and structure of soil microbial communities shifts in response to elevated carbon dioxide. ISME J. 2012 Feb; 6(2):259-72.
        View in: PubMed
      26. Cooper M, La Duc MT, Probst A, Vaishampayan P, Stam C, Benardini JN, Piceno YM, Andersen GL, Venkateswaran K. Comparison of innovative molecular approaches and standard spore assays for assessment of surface cleanliness. Appl Environ Microbiol. 2011 Aug; 77(15):5438-44.
        View in: PubMed
      27. Kelly LC, Cockell CS, Herrera-Belaroussi A, Piceno Y, Andersen G, DeSantis T, Brodie E, Thorsteinsson T, Marteinsson V, Poly F, LeRoux X. Bacterial diversity of terrestrial crystalline volcanic rocks, Iceland. Microb Ecol. 2011 Jul; 62(1):69-79.
        View in: PubMed
      28. Mendes R, Kruijt M, de Bruijn I, Dekkers E, van der Voort M, Schneider JH, Piceno YM, DeSantis TZ, Andersen GL, Bakker PA, Raaijmakers JM. Deciphering the rhizosphere microbiome for disease-suppressive bacteria. Science. 2011 May 27; 332(6033):1097-100.
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      29. Weinert N, Piceno Y, Ding GC, Meincke R, Heuer H, Berg G, Schloter M, Andersen G, Smalla K. PhyloChip hybridization uncovered an enormous bacterial diversity in the rhizosphere of different potato cultivars: many common and few cultivar-dependent taxa. FEMS Microbiol Ecol. 2011 Mar; 75(3):497-506.
        View in: PubMed
      30. Xia S, Duan L, Song Y, Li J, Piceno YM, Andersen GL, Alvarez-Cohen L, Moreno-Andrade I, Huang CL, Hermanowicz SW. Bacterial community structure in geographically distributed biological wastewater treatment reactors. Environ Sci Technol. 2010 Oct 1; 44(19):7391-6.
        View in: PubMed
      31. Hazen TC, Dubinsky EA, DeSantis TZ, Andersen GL, Piceno YM, Singh N, Jansson JK, Probst A, Borglin SE, Fortney JL, Stringfellow WT, Bill M, Conrad ME, Tom LM, Chavarria KL, Alusi TR, Lamendella R, Joyner DC, Spier C, Baelum J, Auer M, Zemla ML, Chakraborty R, Sonnenthal EL, D'haeseleer P, Holman HY, Osman S, Lu Z, Van Nostrand JD, Deng Y, Zhou J, Mason OU. Deep-sea oil plume enriches indigenous oil-degrading bacteria. Science. 2010 Oct 8; 330(6001):204-8.
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      32. Wrighton KC, Virdis B, Clauwaert P, Read ST, Daly RA, Boon N, Piceno Y, Andersen GL, Coates JD, Rabaey K. Bacterial community structure corresponds to performance during cathodic nitrate reduction. ISME J. 2010 Nov; 4(11):1443-55.
        View in: PubMed
      33. Kelly LC, Cockell CS, Piceno YM, Andersen GL, Thorsteinsson T, Marteinsson V. Bacterial diversity of weathered terrestrial Icelandic volcanic glasses. Microb Ecol. 2010 Nov; 60(4):740-52.
        View in: PubMed
      34. Kuramae EE, Gamper HA, Yergeau E, Piceno YM, Brodie EL, Desantis TZ, Andersen GL, van Veen JA, Kowalchuk GA. Microbial secondary succession in a chronosequence of chalk grasslands. ISME J. 2010 May; 4(5):711-5.
        View in: PubMed
      35. Duan L, Xia SQ, Song YH, Piceno YM, Hermanowicz SW. [Using high-density universal 16S rRNA microarray in microbial molecular ecology research]. Huan Jing Ke Xue. 2009 Dec; 30(12):3691-7.
        View in: PubMed
      36. La Duc MT, Osman S, Vaishampayan P, Piceno Y, Andersen G, Spry JA, Venkateswaran K. Comprehensive census of bacteria in clean rooms by using DNA microarray and cloning methods. Appl Environ Microbiol. 2009 Oct; 75(20):6559-67.
        View in: PubMed
      37. Sunagawa S, DeSantis TZ, Piceno YM, Brodie EL, DeSalvo MK, Voolstra CR, Weil E, Andersen GL, Medina M. Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata. ISME J. 2009 May; 3(5):512-21.
        View in: PubMed
      38. Yergeau E, Schoondermark-Stolk SA, Brodie EL, Déjean S, DeSantis TZ, Gonçalves O, Piceno YM, Andersen GL, Kowalchuk GA. Environmental microarray analyses of Antarctic soil microbial communities. ISME J. 2009 Mar; 3(3):340-51.
        View in: PubMed
      39. Tsiamis G, Katsaveli K, Ntougias S, Kyrpides N, Andersen G, Piceno Y, Bourtzis K. Prokaryotic community profiles at different operational stages of a Greek solar saltern. Res Microbiol. 2008 Nov-Dec; 159(9-10):609-27.
        View in: PubMed
      40. DeSantis TZ, Brodie EL, Moberg JP, Zubieta IX, Piceno YM, Andersen GL. High-density universal 16S rRNA microarray analysis reveals broader diversity than typical clone library when sampling the environment. Microb Ecol. 2007 Apr; 53(3):371-83.
        View in: PubMed
      41. Brodie EL, DeSantis TZ, Parker JP, Zubietta IX, Piceno YM, Andersen GL. Urban aerosols harbor diverse and dynamic bacterial populations. Proc Natl Acad Sci U S A. 2007 Jan 2; 104(1):299-304.
        View in: PubMed
      42. DeSantis TZ, Hugenholtz P, Keller K, Brodie EL, Larsen N, Piceno YM, Phan R, Andersen GL. NAST: a multiple sequence alignment server for comparative analysis of 16S rRNA genes. Nucleic Acids Res. 2006 Jul 1; 34(Web Server issue):W394-9.
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      43. White DC, Lytle CA, Gan YD, Piceno YM, Wimpee MH, Peacock AD, Smith CA. Flash detection/identification of pathogens, bacterial spores and bioterrorism agent biomarkers from clinical and environmental matrices. J Microbiol Methods. 2002 Feb; 48(2-3):139-47.
        View in: PubMed
      44. Lovell CR, Piceno YM, Quattro JM, Bagwell CE. Molecular analysis of diazotroph diversity in the rhizosphere of the smooth cordgrass, Spartina alterniflora. Appl Environ Microbiol. 2000 Sep; 66(9):3814-22.
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      45. Bagwell CE, Piceno YM, Ashburne-Lucas A, Lovell CR. Physiological diversity of the rhizosphere diazotroph assemblages of selected salt marsh grasses. Appl Environ Microbiol. 1998 Nov; 64(11):4276-82.
        View in: PubMed
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