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    22833 Publications
    3073 Total Profiles
    24 Edited Profiles

    Clingenpeel, Scott

    TitleBiologist Project Sci/Engr
    SchoolLawrence Berkeley National Lab
    DepartmentGenomics
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone925/927-2595

       Bibliographic 
       Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can sign in to make corrections and additions, or contact us for help.
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      1. Clingenpeel S, Clum A, Schwientek P, Rinke C, Woyke T. Reconstructing each cell's genome within complex microbial communities-dream or reality? Front Microbiol. 2014; 5:771.
        View in: PubMed
      2. Clingenpeel S, Schwientek P, Hugenholtz P, Woyke T. Effects of sample treatments on genome recovery via single-cell genomics. ISME J. 2014 Dec; 8(12):2546-9.
        View in: PubMed
      3. Nurk S, Bankevich A, Antipov D, Gurevich AA, Korobeynikov A, Lapidus A, Prjibelski AD, Pyshkin A, Sirotkin A, Sirotkin Y, Stepanauskas R, Clingenpeel SR, Woyke T, McLean JS, Lasken R, Tesler G, Alekseyev MA, Pevzner PA. Assembling single-cell genomes and mini-metagenomes from chimeric MDA products. J Comput Biol. 2013 Oct; 20(10):714-37.
        View in: PubMed
      4. Clingenpeel S, Kan J, Macur RE, Woyke T, Lovalvo D, Varley J, Inskeep WP, Nealson K, McDermott TR. Yellowstone lake nanoarchaeota. Front Microbiol. 2013; 4:274.
        View in: PubMed
      5. Clingenpeel SR, Moan JL, McGrath DM, Hungate BA, Watwood ME. Stable carbon isotope fractionation in chlorinated ethene degradation by bacteria expressing three toluene oxygenases. Front Microbiol. 2012; 3:63.
        View in: PubMed
      6. Woyke T, Sczyrba A, Lee J, Rinke C, Tighe D, Clingenpeel S, Malmstrom R, Stepanauskas R, Cheng JF. Decontamination of MDA reagents for single cell whole genome amplification. PLoS One. 2011; 6(10):e26161.
        View in: PubMed
      7. Kan J, Clingenpeel S, Macur RE, Inskeep WP, Lovalvo D, Varley J, Gorby Y, McDermott TR, Nealson K. Archaea in Yellowstone Lake. ISME J. 2011 Nov; 5(11):1784-95.
        View in: PubMed
      8. Clingenpeel S, Macur RE, Kan J, Inskeep WP, Lovalvo D, Varley J, Mathur E, Nealson K, Gorby Y, Jiang H, LaFracois T, McDermott TR. Yellowstone Lake: high-energy geochemistry and rich bacterial diversity. Environ Microbiol. 2011 Aug; 13(8):2172-85.
        View in: PubMed
      9. Lovalvo D, Clingenpeel SR, McGinnis S, Macur RE, Varley JD, Inskeep WP, Glime J, Nealson K, McDermott TR. A geothermal-linked biological oasis in Yellowstone Lake, Yellowstone National Park, Wyoming. Geobiology. 2010 Sep; 8(4):327-36.
        View in: PubMed
      10. Clingenpeel SR, D'Imperio S, Oduro H, Druschel GK, McDermott TR. Cloning and in situ expression studies of the Hydrogenobaculum arsenite oxidase genes. Appl Environ Microbiol. 2009 May; 75(10):3362-5.
        View in: PubMed
      11. Clingenpeel SR, Keener WK, Keller CR, De Jesus K, Howard MH, Watwood ME. Activity-dependent fluorescent labeling of bacterial cells expressing the TOL pathway. J Microbiol Methods. 2005 Jan; 60(1):41-6.
        View in: PubMed
      12. Kauffman ME, Keener WK, Clingenpeel SR, Watwood ME, Reed DW, Fujita Y, Lehman RM. Use of 3-hydroxyphenylacetylene for activity-dependent, fluorescent labeling of bacteria that degrade toluene via 3-methylcatechol. J Microbiol Methods. 2003 Dec; 55(3):801-5.
        View in: PubMed
      13. Keener WK, Watwood ME, Schaller KD, Walton MR, Partin JK, Smith WA, Clingenpeel SR. Use of selective inhibitors and chromogenic substrates to differentiate bacteria based on toluene oxygenase activity. J Microbiol Methods. 2001 Sep; 46(3):171-85.
        View in: PubMed
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