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    Cooper, Priscilla

    TitleBiochemist Senior Sci/Engr
    SchoolLawrence Berkeley National Lab
    DepartmentBiological Systems & Eng
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone510/486-7346
    vCardDownload vCard

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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Trego KS, Groesser T, Davalos AR, Parplys AC, Zhao W, Nelson MR, Hlaing A, Shih B, Rydberg B, Pluth JM, Tsai MS, Hoeijmakers JHJ, Sung P, Wiese C, Campisi J, Cooper P. Non-catalytic Roles for XPG with BRCA1 and BRCA2 in Homologous Recombination and Genome Stability. Mol Cell. 2016 Feb 18; 61(4):535-546. PMID: 26833090; PMCID: PMC4761302 [Available on 02/18/17].
      2. Barnhoorn S, Uittenboogaard LM, Jaarsma D, Vermeij WP, Tresini M, Weymaere M, Menoni H, Brandt RM, de Waard MC, Botter SM, Sarker AH, Jaspers NG, van der Horst GT, Cooper P, Hoeijmakers JH, van der Pluijm I. Cell-autonomous progeroid changes in conditional mouse models for repair endonuclease XPG deficiency. PLoS Genet. 2014 Oct; 10(10):e1004686. PMID: 25299392; PMCID: PMC4191938.
      3. Querol-Audí J, Yan C, Xu X, Tsutakawa SE, Tsai MS, Tainer JA, Cooper P, Nogales E, Ivanov I. Repair complexes of FEN1 endonuclease, DNA, and Rad9-Hus1-Rad1 are distinguished from their PCNA counterparts by functionally important stability. Proc Natl Acad Sci U S A. 2012 May 29; 109(22):8528-33. PMID: 22586102; PMCID: PMC3365210.
      4. Trego KS, Chernikova SB, Davalos AR, Perry JJ, Finger LD, Ng C, Tsai MS, Yannone SM, Tainer JA, Campisi J, Cooper P. The DNA repair endonuclease XPG interacts directly and functionally with the WRN helicase defective in Werner syndrome. Cell Cycle. 2011 Jun 15; 10(12):1998-2007. PMID: 21558802; PMCID: PMC3154418.
      5. Tsutakawa SE, Classen S, Chapados BR, Arvai AS, Finger LD, Guenther G, Tomlinson CG, Thompson P, Sarker AH, Shen B, Cooper P, Grasby JA, Tainer JA. Human flap endonuclease structures, DNA double-base flipping, and a unified understanding of the FEN1 superfamily. Cell. 2011 Apr 15; 145(2):198-211. PMID: 21496641; PMCID: PMC3086263.
      6. Campeau E, Ruhl VE, Rodier F, Smith CL, Rahmberg BL, Fuss JO, Campisi J, Yaswen P, Cooper P, Kaufman PD. A versatile viral system for expression and depletion of proteins in mammalian cells. PLoS One. 2009 Aug 06; 4(8):e6529. PMID: 19657394; PMCID: PMC2717805.
      7. Fan L, Fuss JO, Cheng QJ, Arvai AS, Hammel M, Roberts VA, Cooper P, Tainer JA. XPD helicase structures and activities: insights into the cancer and aging phenotypes from XPD mutations. Cell. 2008 May 30; 133(5):789-800. PMID: 18510924; PMCID: PMC3055247.
      8. Pluth JM, Yamazaki V, Cooper BA, Rydberg BE, Kirchgessner CU, Cooper P. DNA double-strand break and chromosomal rejoining defects with misrejoining in Nijmegen breakage syndrome cells. DNA Repair (Amst). 2008 Jan 01; 7(1):108-18. PMID: 17919995.
        View in: PubMed
      9. Tsutakawa SE, Hura GL, Frankel KA, Cooper P, Tainer JA. Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography. J Struct Biol. 2007 May; 158(2):214-23. PMID: 17182256.
        View in: PubMed
      10. Fuss JO, Cooper P. DNA repair: dynamic defenders against cancer and aging. PLoS Biol. 2006 Jun; 4(6):e203. PMID: 16752948; PMCID: PMC1475692.
      11. Perry JJ, Yannone SM, Holden LG, Hitomi C, Asaithamby A, Han S, Cooper P, Chen DJ, Tainer JA. WRN exonuclease structure and molecular mechanism imply an editing role in DNA end processing. Nat Struct Mol Biol. 2006 May; 13(5):414-22. PMID: 16622405.
        View in: PubMed
      12. Fan L, Arvai AS, Cooper P, Iwai S, Hanaoka F, Tainer JA. Conserved XPB core structure and motifs for DNA unwinding: implications for pathway selection of transcription or excision repair. Mol Cell. 2006 Apr 07; 22(1):27-37. PMID: 16600867.
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      13. Le Page F, Kwoh EE, Avrutskaya A, Gentil A, Leadon SA, Sarasin A, Cooper P. Transcription-coupled repair of 8-oxoguanine: requirement for XPG, TFIIH, and CSB and implications for Cockayne syndrome. Cell. 2005 Nov 18; 123(4):711. PMID: 16329169.
        View in: PubMed
      14. Sarker AH, Tsutakawa SE, Kostek S, Ng C, Shin DS, Peris M, Campeau E, Tainer JA, Nogales E, Cooper P. Recognition of RNA polymerase II and transcription bubbles by XPG, CSB, and TFIIH: insights for transcription-coupled repair and Cockayne Syndrome. Mol Cell. 2005 Oct 28; 20(2):187-98. PMID: 16246722.
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      15. Kalogeraki VS, Tornaletti S, Cooper P, Hanawalt PC. Comparative TFIIS-mediated transcript cleavage by mammalian RNA polymerase II arrested at a lesion in different transcription systems. DNA Repair (Amst). 2005 Sep 28; 4(10):1075-87. PMID: 16046193.
        View in: PubMed
      16. Cooper P, Nouspikel T, Clarkson SG. Retraction. Science. 2005 Jun 17; 308(5729):1740. PMID: 15961651.
        View in: PubMed
      17. Wang J, Pluth JM, Cooper P, Cowan MJ, Chen DJ, Yannone SM. Artemis deficiency confers a DNA double-strand break repair defect and Artemis phosphorylation status is altered by DNA damage and cell cycle progression. DNA Repair (Amst). 2005 May 02; 4(5):556-70. PMID: 15811628.
        View in: PubMed
      18. Rydberg B, Cooper B, Cooper P, Holley WR, Chatterjee A. Dose-dependent misrejoining of radiation-induced DNA double-strand breaks in human fibroblasts: experimental and theoretical study for high- and low-LET radiation. Radiat Res. 2005 May; 163(5):526-34. PMID: 15850414.
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      19. Wang JY, Sarker AH, Cooper P, Volkert MR. The single-strand DNA binding activity of human PC4 prevents mutagenesis and killing by oxidative DNA damage. Mol Cell Biol. 2004 Jul; 24(13):6084-93. PMID: 15199162; PMCID: PMC480877.
      20. Rydberg B, Heilbronn L, Holley WR, Löbrich M, Zeitlin C, Chatterjee A, Cooper P. Spatial distribution and yield of DNA double-strand breaks induced by 3-7 MeV helium ions in human fibroblasts. Radiat Res. 2002 Jul; 158(1):32-42. PMID: 12071801.
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      21. Le Page F, Cabral-Neto J, Cooper P, Sarasin A. Transcription-coupled repair of 8-oxoguanine in human cells. Methods Enzymol. 2002; 353:536-47. PMID: 12078525.
        View in: PubMed
      22. Weinfeld M, Xing JZ, Lee J, Leadon SA, Cooper P, Le XC. Factors influencing the removal of thymine glycol from DNA in gamma-irradiated human cells. Prog Nucleic Acid Res Mol Biol. 2001; 68:139-49. PMID: 11554293.
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      23. Fouladi B, Waldren CA, Rydberg B, Cooper P. Comparison of repair of DNA double-strand breaks in identical sequences in primary human fibroblast and immortal hamster-human hybrid cells harboring a single copy of human chromosome 11. Radiat Res. 2000 Jun; 153(6):795-804. PMID: 10825755.
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      24. Le Page F, Kwoh EE, Avrutskaya A, Gentil A, Leadon SA, Sarasin A, Cooper P. Transcription-coupled repair of 8-oxoguanine: requirement for XPG, TFIIH, and CSB and implications for Cockayne syndrome. Cell. 2000 Apr 14; 101(2):159-71. PMID: 10786832.
        View in: PubMed
      25. Tsutakawa SE, Cooper P. Transcription-coupled repair of oxidative DNA damage in human cells: mechanisms and consequences. Cold Spring Harb Symp Quant Biol. 2000; 65:201-15. PMID: 12760034.
        View in: PubMed
      26. Löbrich M, Cooper P, Rydberg B. Joining of correct and incorrect DNA ends at double-strand breaks produced by high-linear energy transfer radiation in human fibroblasts. Radiat Res. 1998 Dec; 150(6):619-26. PMID: 9840181.
        View in: PubMed
      27. Rydberg B, Lobrich M, Cooper P. Repair of clustered DNA damage caused by high LET radiation in human fibroblasts. Phys Med. 1998 Jul; 14 Suppl 1:24-8. PMID: 11542637.
        View in: PubMed
      28. Nouspikel T, Lalle P, Leadon SA, Cooper P, Clarkson SG. A common mutational pattern in Cockayne syndrome patients from xeroderma pigmentosum group G: implications for a second XPG function. Proc Natl Acad Sci U S A. 1997 Apr 01; 94(7):3116-21. PMID: 9096355; PMCID: PMC20331.
      29. Cooper P, Nouspikel T, Clarkson SG, Leadon SA. Defective transcription-coupled repair of oxidative base damage in Cockayne syndrome patients from XP group G. Science. 1997 Feb 14; 275(5302):990-3. PMID: 9020084.
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      30. Löbrich M, Cooper P, Rydberg B. Non-random distribution of DNA double-strand breaks induced by particle irradiation. Int J Radiat Biol. 1996 Nov; 70(5):493-503. PMID: 8947529.
        View in: PubMed
      31. Löbrich M, Rydberg B, Cooper P. Random-breakage mapping method applied to human DNA sequences. Nucleic Acids Res. 1996 May 15; 24(10):1802-8. PMID: 8657558; PMCID: PMC145864.
      32. Löbrich M, Rydberg B, Cooper P. Repair of x-ray-induced DNA double-strand breaks in specific Not I restriction fragments in human fibroblasts: joining of correct and incorrect ends. Proc Natl Acad Sci U S A. 1995 Dec 19; 92(26):12050-4. PMID: 8618842; PMCID: PMC40294.
      33. Löbrich M, Rydberg B, Cooper P. DNA double-strand breaks induced by high-energy neon and iron ions in human fibroblasts. II. Probing individual notI fragments by hybridization. Radiat Res. 1994 Aug; 139(2):142-51. PMID: 8052689.
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      34. Rydberg B, Löbrich M, Cooper P. DNA double-strand breaks induced by high-energy neon and iron ions in human fibroblasts. I. Pulsed-field gel electrophoresis method. Radiat Res. 1994 Aug; 139(2):133-41. PMID: 8052688.
        View in: PubMed
      35. Cooper P, Leadon SA. Defective repair of ionizing radiation damage in Cockayne's syndrome and xeroderma pigmentosum group G. Ann N Y Acad Sci. 1994 Jul 29; 726:330-2. PMID: 8092696.
        View in: PubMed
      36. Leadon SA, Cooper P. Preferential repair of ionizing radiation-induced damage in the transcribed strand of an active human gene is defective in Cockayne syndrome. Proc Natl Acad Sci U S A. 1993 Nov 15; 90(22):10499-503. PMID: 8248136; PMCID: PMC47804.
      37. Hanawalt PC, Cooper P, Ganesan AK, Lloyd RS, Smith CA, Zolan ME. Repair responses to DNA damage: enzymatic pathways in E coli and human cells. J Cell Biochem. 1982; 18(3):271-83. PMID: 7040432.
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      38. Hanawalt PC, Cooper P, Smith CA. Repair replication schemes in bacteria and human cells. Prog Nucleic Acid Res Mol Biol. 1981; 26:181-96. PMID: 7025093.
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      39. Hanawalt PC, Cooper P, Ganesan AK, Smith CA. DNA repair in bacteria and mammalian cells. Annu Rev Biochem. 1979; 48:783-836. PMID: 382997.
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      40. Cooper P, Hanawalt PC. Heterogeneity of patch size in repair replicated DNA in Escherichia coli. J Mol Biol. 1972 Jun 14; 67(1):1-10. PMID: 4557600.
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      41. Cooper P, Hanawalt PC. Role of DNA polymerase I and the rec system in excision-repair in Escherichia coli. Proc Natl Acad Sci U S A. 1972 May; 69(5):1156-60. PMID: 4556455; PMCID: PMC426652.
      42. Cooper P, Hanawalt PC. Absence of repair replication following ultraviolet irradiation of an excision-deficient mutant of Escherichia coli. Photochem Photobiol. 1971 Jan; 13(1):83-5. PMID: 4926149.
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