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    22833 Publications
    3073 Total Profiles
    24 Edited Profiles

    Cipriano, Michael

    TitleSoftware Developer 2
    SchoolLawrence Berkeley National Lab
    DepartmentPhysical Biosciences
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone510/486-5692

       Bibliographic 
       Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can sign in to make corrections and additions, or contact us for help.
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      1. Lévêque MF, Berry L, Cipriano MJ, Nguyen HM, Striepen B, Besteiro S. Autophagy-Related Protein ATG8 Has a Noncanonical Function for Apicoplast Inheritance in Toxoplasma gondii. MBio. 2015; 6(6).
        View in: PubMed
      2. Vinayak S, Pawlowic MC, Sateriale A, Brooks CF, Studstill CJ, Bar-Peled Y, Cipriano MJ, Striepen B. Genetic modification of the diarrhoeal pathogen Cryptosporidium parvum. Nature. 2015 Jul 23; 523(7561):477-80.
        View in: PubMed
      3. Hahn ME, McArthur AG, Karchner SI, Franks DG, Jenny MJ, Timme-Laragy AR, Stegeman JJ, Woodin BR, Cipriano MJ, Linney E. The Transcriptional Response to Oxidative Stress during Vertebrate Development: Effects of tert-Butylhydroquinone and 2,3,7,8-Tetrachlorodibenzo-p-Dioxin. PLoS One. 2014; 9(11):e113158.
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      4. Ferella M, Davids BJ, Cipriano MJ, Birkeland SR, Palm D, Gillin FD, McArthur AG, Svärd S. Gene expression changes during Giardia-host cell interactions in serum-free medium. Mol Biochem Parasitol. 2014 Oct; 197(1-2):21-3.
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      5. Cipriano MJ, Novichkov PN, Kazakov AE, Rodionov DA, Arkin AP, Gelfand MS, Dubchak I. RegTransBase--a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes. BMC Genomics. 2013; 14:213.
        View in: PubMed
      6. Hagen KD, Hirakawa MP, House SA, Schwartz CL, Pham JK, Cipriano MJ, De La Torre MJ, Sek AC, Du G, Forsythe BM, Dawson SC. Novel structural components of the ventral disc and lateral crest in Giardia intestinalis. PLoS Negl Trop Dis. 2011 Dec; 5(12):e1442.
        View in: PubMed
      7. Birkeland SR, Preheim SP, Davids BJ, Cipriano MJ, Palm D, Reiner DS, Svärd SG, Gillin FD, McArthur AG. Transcriptome analyses of the Giardia lamblia life cycle. Mol Biochem Parasitol. 2010 Nov; 174(1):62-5.
        View in: PubMed
      8. Fritz-Laylin LK, Prochnik SE, Ginger ML, Dacks JB, Carpenter ML, Field MC, Kuo A, Paredez A, Chapman J, Pham J, Shu S, Neupane R, Cipriano M, Mancuso J, Tu H, Salamov A, Lindquist E, Shapiro H, Lucas S, Grigoriev IV, Cande WZ, Fulton C, Rokhsar DS, Dawson SC. The genome of Naegleria gruberi illuminates early eukaryotic versatility. Cell. 2010 Mar 5; 140(5):631-42.
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      9. Taft AS, Vermeire JJ, Bernier J, Birkeland SR, Cipriano MJ, Papa AR, McArthur AG, Yoshino TP. Transcriptome analysis of Schistosoma mansoni larval development using serial analysis of gene expression (SAGE). Parasitology. 2009 Apr; 136(5):469-85.
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      10. Ochsenreiter T, Cipriano M, Hajduk SL. Alternative mRNA editing in trypanosomes is extensive and may contribute to mitochondrial protein diversity. PLoS One. 2008; 3(2):e1566.
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      11. Morrison HG, McArthur AG, Gillin FD, Aley SB, Adam RD, Olsen GJ, Best AA, Cande WZ, Chen F, Cipriano MJ, Davids BJ, Dawson SC, Elmendorf HG, Hehl AB, Holder ME, Huse SM, Kim UU, Lasek-Nesselquist E, Manning G, Nigam A, Nixon JE, Palm D, Passamaneck NE, Prabhu A, Reich CI, Reiner DS, Samuelson J, Svard SG, Sogin ML. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Science. 2007 Sep 28; 317(5846):1921-6.
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      12. Ekanayake DK, Cipriano MJ, Sabatini R. Telomeric co-localization of the modified base J and contingency genes in the protozoan parasite Trypanosoma cruzi. Nucleic Acids Res. 2007; 35(19):6367-77.
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      13. Williams DL, Sayed AA, Bernier J, Birkeland SR, Cipriano MJ, Papa AR, McArthur AG, Taft A, Vermeire JJ, Yoshino TP. Profiling Schistosoma mansoni development using serial analysis of gene expression (SAGE). Exp Parasitol. 2007 Nov; 117(3):246-58.
        View in: PubMed
      14. Gu S, Anderson I, Kunin V, Cipriano M, Minovitsky S, Weber G, Amenta N, Hamann B, Dubchak I. TreeQ-VISTA: an interactive tree visualization tool with functional annotation query capabilities. Bioinformatics. 2007 Mar 15; 23(6):764-6.
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      15. Lauwaet T, Davids BJ, Torres-Escobar A, Birkeland SR, Cipriano MJ, Preheim SP, Palm D, Svärd SG, McArthur AG, Gillin FD. Protein phosphatase 2A plays a crucial role in Giardia lamblia differentiation. Mol Biochem Parasitol. 2007 Mar; 152(1):80-9.
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      16. Davids BJ, Reiner DS, Birkeland SR, Preheim SP, Cipriano MJ, McArthur AG, Gillin FD. A new family of giardial cysteine-rich non-VSP protein genes and a novel cyst protein. PLoS One. 2006; 1:e44.
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      17. Ochsenreiter T, Cipriano M, Hajduk SL. KISS: the kinetoplastid RNA editing sequence search tool. RNA. 2007 Jan; 13(1):1-4.
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      18. Kazakov AE, Cipriano MJ, Novichkov PS, Minovitsky S, Vinogradov DV, Arkin A, Mironov AA, Gelfand MS, Dubchak I. RegTransBase--a database of regulatory sequences and interactions in a wide range of prokaryotic genomes. Nucleic Acids Res. 2007 Jan; 35(Database issue):D407-12.
        View in: PubMed
      19. Messerli SM, Morgan W, Birkeland SR, Bernier J, Cipriano MJ, McArthur AG, Greenberg RM. Nitric oxide-dependent changes in Schistosoma mansoni gene expression. Mol Biochem Parasitol. 2006 Dec; 150(2):367-70.
        View in: PubMed
      20. Faulkner SD, Oli MW, Kieft R, Cotlin L, Widener J, Shiflett A, Cipriano MJ, Pacocha SE, Birkeland SR, Hajduk SL, McArthur AG. In vitro generation of human high-density-lipoprotein-resistant Trypanosoma brucei brucei. Eukaryot Cell. 2006 Aug; 5(8):1276-86.
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      21. Dyhrman ST, Haley ST, Birkeland SR, Wurch LL, Cipriano MJ, McArthur AG. Long serial analysis of gene expression for gene discovery and transcriptome profiling in the widespread marine coccolithophore Emiliania huxleyi. Appl Environ Microbiol. 2006 Jan; 72(1):252-60.
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      22. Palm D, Weiland M, McArthur AG, Winiecka-Krusnell J, Cipriano MJ, Birkeland SR, Pacocha SE, Davids B, Gillin F, Linder E, Svärd S. Developmental changes in the adhesive disk during Giardia differentiation. Mol Biochem Parasitol. 2005 Jun; 141(2):199-207.
        View in: PubMed
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