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    Huntemann, Marcel

    TitleSoftware Developer 3
    SchoolLawrence Berkeley National Lab
    DepartmentGenomics
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone925/927-2534

       Bibliographic 
       Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can sign in to make corrections and additions, or contact us for help.
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      1. Choi DH, Ahn C, Jang GI, Lapidus A, Han J, Reddy TB, Huntemann M, Pati A, Ivanova N, Markowitz V, Rohde M, Tindall B, Göker M, Woyke T, Klenk HP, Kyrpides NC, Cho BC. High-quality draft genome sequence of Gracilimonas tropica CL-CB462(T) (DSM 19535(T)), isolated from a Synechococcus culture. Stand Genomic Sci. 2015; 10:98.
        View in: PubMed
      2. Huntemann M, Ivanova NN, Mavromatis K, Tripp HJ, Paez-Espino D, Palaniappan K, Szeto E, Pillay M, Chen IM, Pati A, Nielsen T, Markowitz VM, Kyrpides NC. The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4). Stand Genomic Sci. 2015; 10:86.
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      3. Lau SC, Riedel T, Fiebig A, Han J, Huntemann M, Petersen J, Ivanova NN, Markowitz V, Woyke T, Göker M, Kyrpides NC, Klenk HP, Qian PY. Genome sequence of the pink-pigmented marine bacterium Loktanella hongkongensis type strain (UST950701-009P(T)), a representative of the Roseobacter group. Stand Genomic Sci. 2015; 10:51.
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      4. Tisa LS, Beauchemin N, Cantor MN, Furnholm T, Ghodhbane-Gtari F, Goodwin L, Copeland A, Gtari M, Huntemann M, Ivanova N, Kyrpides N, Markowitz V, Mavrommatis K, Mikhailova N, Nouioui I, Oshone R, Ovchinnikova G, Pagani I, Palaniappan K, Pati A, Sen A, Shapiro N, Szeto E, Wall L, Wishart J, Woyke T. Draft Genome Sequence of Frankia sp. Strain DC12, an Atypical, Noninfective, Ineffective Isolate from Datisca cannabina. Genome Announc. 2015; 3(4).
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      5. Yassin AF, Lapidus A, Han J, Reddy TB, Huntemann M, Pati A, Ivanova N, Markowitz V, Woyke T, Klenk HP, Kyrpides NC. High quality draft genome sequence of Corynebacterium ulceribovis type strain IMMIB-L1395(T) (DSM 45146(T)). Stand Genomic Sci. 2015; 10:50.
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      6. Sakamoto M, Lapidus AL, Han J, Trong S, Haynes M, Reddy TB, Mikhailova N, Huntemann M, Pati A, Ivanova NN, Pukall R, Markowitz VM, Woyke T, Klenk HP, Kyrpides NC, Ohkuma M. High quality draft genome sequence of Bacteroides barnesiae type strain BL2(T) (DSM 18169(T)) from chicken caecum. Stand Genomic Sci. 2015; 10:48.
        View in: PubMed
      7. Hahnke RL, Stackebrandt E, Meier-Kolthoff JP, Tindall BJ, Huang S, Rohde M, Lapidus A, Han J, Trong S, Haynes M, Reddy TB, Huntemann M, Pati A, Ivanova NN, Mavromatis K, Markowitz V, Woyke T, Göker M, Kyrpides NC, Klenk HP. High quality draft genome sequence of Flavobacterium rivuli type strain WB 3.3-2(T) (DSM 21788(T)), a valuable source of polysaccharide decomposing enzymes. Stand Genomic Sci. 2015; 10:46.
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      8. Rooney EA, Rowe KT, Guseva A, Huntemann M, Han JK, Chen A, Kyrpides NC, Mavromatis K, Markowitz VM, Palaniappan K, Ivanova N, Pati A, Liolios K, Nordberg HP, Cantor MN, Hua SX, Shapiro N, Woyke T, Lynd LR, Izquierdo JA. Draft Genome Sequence of the Cellulolytic and Xylanolytic Thermophile Clostridium clariflavum Strain 4-2a. Genome Announc. 2015; 3(4).
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      9. Gutierrez T, Whitman WB, Huntemann M, Copeland A, Chen A, Kyrpides N, Markowitz V, Pillay M, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen E, Pati A, Stamatis D, Reddy TB, Ngan CY, Chovatia M, Daum C, Shapiro N, Cantor MN, Woyke T. Genome Sequence of Halomonas sp. Strain MCTG39a, a Hydrocarbon-Degrading and Exopolymeric Substance-Producing Bacterium. Genome Announc. 2015; 3(4).
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      10. Gutierrez T, Whitman WB, Huntemann M, Copeland A, Chen A, Kyrpides N, Markowitz V, Pillay M, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen E, Pati A, Stamatis D, Reddy TB, Ngan CY, Chovatia M, Daum C, Shapiro N, Cantor MN, Woyke T. Genome Sequence of Porticoccus hydrocarbonoclasticus Strain MCTG13d, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton. Genome Announc. 2015; 3(3).
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      11. Laviad S, Lapidus A, Han J, Haynes M, Reddy T, Huntemann M, Pati A, Ivanova NN, Mavromatis K, Lang E, Rohde M, Markowitz V, Woyke T, Klenk HP, Kyrpides NC, Halpern M. High quality draft genome sequence of Brachymonas chironomi AIMA4(T) (DSM 19884(T)) isolated from a Chironomus sp. egg mass. Stand Genomic Sci. 2015; 10:29.
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      12. He S, Malfatti SA, McFarland JW, Anderson FE, Pati A, Huntemann M, Tremblay J, Glavina Del Rio T, Waldrop MP, Windham-Myers L, Tringe SG. Patterns in wetland microbial community composition and functional gene repertoire associated with methane emissions. MBio. 2015; 6(3).
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      13. Lee LL, Izquierdo JA, Blumer-Schuette SE, Zurawski JV, Conway JM, Cottingham RW, Huntemann M, Copeland A, Chen IM, Kyrpides N, Markowitz V, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen E, Pati A, Stamatis D, Reddy TB, Shapiro N, Nordberg HP, Cantor MN, Hua SX, Woyke T, Kelly RM. Complete Genome Sequences of Caldicellulosiruptor sp. Strain Rt8.B8, Caldicellulosiruptor sp. Strain Wai35.B1, and "Thermoanaerobacter cellulolyticus". Genome Announc. 2015; 3(3).
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      14. Laviad S, Lapidus A, Copeland A, Reddy T, Huntemann M, Pati A, Ivanova NN, Markowitz VM, Pukall R, Klenk HP, Woyke T, Kyrpides NC, Halpern M. High quality draft genome sequence of Leucobacter chironomi strain MM2LB(T) (DSM 19883(T)) isolated from a Chironomus sp. egg mass. Stand Genomic Sci. 2015; 10:21.
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      15. Mukherjee S, Huntemann M, Ivanova N, Kyrpides NC, Pati A. Large-scale contamination of microbial isolate genomes by Illumina PhiX control. Stand Genomic Sci. 2015; 10:18.
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      16. Gutierrez T, Thompson HF, Angelova A, Whitman WB, Huntemann M, Copeland A, Chen A, Kyrpides N, Markowitz V, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen E, Pati A, Stamatis D, Reddy TB, Ngan CY, Chovatia M, Daum C, Shapiro N, Cantor MN, Woyke T. Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton. Genome Announc. 2015; 3(2).
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      17. Kotak M, Isanapong J, Goodwin L, Bruce D, Chen A, Han CS, Huntemann M, Ivanova N, Land ML, Nolan M, Pati A, Woyke T, Rodrigues JL. Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes. Genome Announc. 2015; 3(2).
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      18. McIlroy SJ, Lapidus A, Thomsen TR, Han J, Haynes M, Lobos E, Huntemann M, Pati A, Ivanova NN, Markowitz V, Verbarg S, Woyke T, Klenk HP, Kyrpides N, Nielsen PH. High quality draft genome sequence of Meganema perideroedes str. Gr1(T) and a proposal for its reclassification to the family Meganemaceae fam. nov. Stand Genomic Sci. 2015; 10:23.
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      19. Mukherjee S, Lapidus A, Shapiro N, Cheng JF, Han J, Reddy T, Huntemann M, Ivanova N, Mikhailova N, Chen A, Palaniappan K, Spring S, Göker M, Markowitz V, Woyke T, Tindall BJ, Klenk HP, Kyrpides NC, Pati A. High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India. Stand Genomic Sci. 2015; 10:8.
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      20. Gao XY, Zhi XY, Li HW, Zhou Y, Lapidus A, Han J, Haynes M, Lobos E, Huntemann M, Pati A, Ivanova NN, Mavromatis K, Tindall BJ, Markowitz V, Woyke T, Klenk HP, Kyrpides NC, Li WJ. Draft genome sequence of Halomonas lutea strain YIM 91125(T) (DSM 23508(T)) isolated from the alkaline Lake Ebinur in Northwest China. Stand Genomic Sci. 2015; 10:1.
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      21. Garau G, Terpolilli J, Hill Y, Tian R, Howieson J, Bräu L, Goodwin L, Han J, Reddy T, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Genome sequence of Ensifer medicae Di28; an effective N2-fixing microsymbiont of Medicago murex and M. polymorpha. Stand Genomic Sci. 2014; 9:4.
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      22. Kelly S, Sullivan J, Ronson C, Tian R, Bräu L, Munk C, Goodwin L, Han C, Woyke T, Reddy T, Huntemann M, Pati A, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Genome sequence of the Lotus spp. microsymbiont Mesorhizobium loti strain R7A. Stand Genomic Sci. 2014; 9:6.
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      23. Ardley J, Tian R, Howieson J, Yates R, Bräu L, Han J, Lobos E, Huntemann M, Chen A, Mavromatis K, Markowitz V, Ivanova N, Pati A, Goodwin L, Woyke T, Kyrpides N, Reeve W. Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598. Stand Genomic Sci. 2014; 9:5.
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      24. Scheuner C, Tindall BJ, Lu M, Nolan M, Lapidus A, Cheng JF, Goodwin L, Pitluck S, Huntemann M, Liolios K, Pagani I, Mavromatis K, Ivanova N, Pati A, Chen A, Palaniappan K, Jeffries CD, Hauser L, Land M, Mwirichia R, Rohde M, Abt B, Detter JC, Woyke T, Eisen JA, Markowitz V, Hugenholtz P, Göker M, Kyrpides NC, Klenk HP. Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and emended descriptions of the order Planctomycetales and the family Planctomycetaceae. Stand Genomic Sci. 2014; 9:10.
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      25. Reeve W, Sullivan J, Ronson C, Tian R, Bräu L, Davenport K, Goodwin L, Chain P, Woyke T, Lobos E, Huntemann M, Pati A, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N. Genome sequence of the Lotus corniculatus microsymbiont Mesorhizobium loti strain R88B. Stand Genomic Sci. 2014; 9:3.
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      26. Vishnivetskaya TA, Chauhan A, Layton AC, Pfiffner SM, Huntemann M, Copeland A, Chen A, Kyrpides NC, Markowitz VM, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen EW, Pati A, Stamatis D, Reddy TB, Shapiro N, Nordberg HP, Cantor MN, Hua XS, Woyke T. Draft genome sequences of 10 strains of the genus exiguobacterium. Genome Announc. 2014; 2(5).
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      27. Hawley ER, Malfatti SA, Pagani I, Huntemann M, Chen A, Foster B, Copeland A, Del Rio TG, Pati A, Jansson JR, Gilbert JA, Tringe SG, Lorenson TD, Hess M. Metagenomes from two microbial consortia associated with Santa Barbara seep oil. Mar Genomics. 2014 Dec; 18 Pt B:97-9.
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      28. Ivanova NN, Schwientek P, Tripp HJ, Rinke C, Pati A, Huntemann M, Visel A, Woyke T, Kyrpides NC, Rubin EM. Stop codon reassignments in the wild. Science. 2014 May 23; 344(6186):909-13.
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      29. Zhou Y, Li R, Gao XY, Lapidus A, Han J, Haynes M, Lobos E, Huntemann M, Pati A, Ivanova NN, Rohde M, Mavromatis K, Tindall BJ, Markowitz V, Woyke T, Klenk HP, Kyrpides NC, Li WJ. High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169(T) (DSM 21076(T)) from a sea urchin in southern China. Stand Genomic Sci. 2014 Jun 15; 9(3):1020-30.
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      30. Riedel T, Fiebig A, Han J, Huntemann M, Spring S, Petersen J, Ivanova NN, Markowitz V, Woyke T, Göker M, Kyrpides NC, Klenk HP. Genome sequence of the Wenxinia marina type strain (DSM 24838(T)), a representative of the Roseobacter group isolated from oilfield sediments. Stand Genomic Sci. 2014 Jun 15; 9(3):855-65.
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      31. Biddle AS, Leschine S, Huntemann M, Han J, Chen A, Kyrpides N, Markowitz V, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Schaumberg A, Pati A, Stamatis D, Reddy T, Lobos E, Goodwin L, Nordberg HP, Cantor MN, Hua SX, Woyke T, Blanchard JL. The complete genome sequence of Clostridium indolis DSM 755(T.). Stand Genomic Sci. 2014 Jun 15; 9(3):1089-104.
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      32. Reeve W, Parker M, Tian R, Goodwin L, Teshima H, Tapia R, Han C, Han J, Liolios K, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N. Genome sequence of Microvirga lupini strain LUT6(T), a novel Lupinus alphaproteobacterial microsymbiont from Texas. Stand Genomic Sci. 2014 Jun 15; 9(3):1159-67.
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      33. Reeve W, Ballard R, Drew E, Tian R, Bräu L, Goodwin L, Huntemann M, Han J, Tatiparthi R, Chen A, Mavrommatis K, Markowitz V, Palaniappan K, Ivanova N, Pati A, Woyke T, Kyrpides N. Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128. Stand Genomic Sci. 2014 Jun 15; 9(3):602-13.
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      34. Hawley ER, Piao H, Scott NM, Malfatti S, Pagani I, Huntemann M, Chen A, Glavina Del Rio T, Foster B, Copeland A, Jansson J, Pati A, Tringe S, Gilbert JA, Lorenson TD, Hess M. Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California. Stand Genomic Sci. 2014 Jun 15; 9(3):1259-74.
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      35. Reeve W, Ballard R, Howieson J, Drew E, Tian R, Bräu L, Munk C, Davenport K, Chain P, Goodwin L, Pagani I, Huntemann M, Mavrommatis K, Pati A, Markowitz V, Ivanova N, Woyke T, Kyrpides N. Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece. Stand Genomic Sci. 2014 Jun 15; 9(3):514-26.
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      36. Reeve W, Tian R, Bräu L, Goodwin L, Munk C, Detter C, Tapia R, Han C, Liolios K, Huntemann M, Pati A, Woyke T, Mavrommatis K, Markowitz V, Ivanova N, Kyrpides N, Willems A. Genome sequence of Ensifer arboris strain LMG 14919(T); a microsymbiont of the legume Prosopis chilensis growing in Kosti, Sudan. Stand Genomic Sci. 2014 Jun 15; 9(3):473-83.
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      37. Willems A, Tian R, Bräu L, Goodwin L, Han J, Liolios K, Huntemann M, Pati A, Woyke T, Mavrommatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Genome sequence of Burkholderia mimosarum strain LMG 23256(T), a Mimosa pigra microsymbiont from Anso, Taiwan. Stand Genomic Sci. 2014 Jun 15; 9(3):484-94.
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      38. Reeve W, Ardley J, Tian R, De Meyer S, Terpolilli J, Melino V, Tiwari R, Yates R, O'Hara G, Howieson J, Ninawi M, Zhang X, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Szeto E, Ivanova N, Pagani I, Pati A, Goodwin L, Woyke T, Kyrpides N. Genome sequence of the Listia angolensis microsymbiont Microvirga lotononidis strain WSM3557(T.). Stand Genomic Sci. 2014 Jun 15; 9(3):540-50.
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      39. Walker R, Watkin E, Tian R, Bräu L, O'Hara G, Goodwin L, Han J, Lobos E, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2230 from Karijini National Park, Australia. Stand Genomic Sci. 2014 Jun 15; 9(3):551-61.
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      40. Terpolilli J, Garau G, Hill Y, Tian R, Howieson J, Bräu L, Goodwin L, Han J, Liolios K, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Genome sequence of Ensifer medicae strain WSM1369; an effective microsymbiont of the annual legume Medicago sphaerocarpos. Stand Genomic Sci. 2013 Dec 20; 9(2):420-30.
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      41. Reeve W, Tian R, De Meyer S, Melino V, Terpolilli J, Ardley J, Tiwari R, Howieson J, Yates R, O'Hara G, Ninawi M, Teshima H, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Ivanova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Pitluck S, Woyke T, Kyrpides N. Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1. Stand Genomic Sci. 2013 Dec 20; 9(2):243-53.
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      42. Reeve W, Melino V, Ardley J, Tian R, De Meyer S, Terpolilli J, Tiwari R, Yates R, O'Hara G, Howieson J, Ninawi M, Held B, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Szeto E, Ivanova N, Mikhailova N, Pagani I, Pati A, Goodwin L, Woyke T, Kyrpides N. Genome sequence of the Trifolium rueppellianum -nodulating Rhizobium leguminosarum bv. trifolii strain WSM2012. Stand Genomic Sci. 2013 Dec 20; 9(2):283-93.
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      43. Galardini M, Bazzicalupo M, Biondi E, Brambilla E, Brilli M, Bruce D, Chain P, Chen A, Daligault H, Davenport KW, Deshpande S, Detter JC, Goodwin LA, Han C, Han J, Huntemann M, Ivanova N, Klenk HP, Kyrpides NC, Markowitz V, Mavrommatis K, Mocali S, Nolan M, Pagani I, Pati A, Pini F, Pitluck S, Spini G, Szeto E, Teshima H, Woyke T, Mengoni A. Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58. Stand Genomic Sci. 2013 Dec 20; 9(2):325-33.
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      44. Reeve W, De Meyer S, Terpolilli J, Melino V, Ardley J, Tian R, Tiwari R, Howieson J, Yates R, O'Hara G, Ninawi M, Lu M, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Ivanova N, Pagani I, Pati A, Goodwin L, Woyke T, Kyrpides N. Genome sequence of the Ornithopus/Lupinus-nodulating Bradyrhizobium sp. strain WSM471. Stand Genomic Sci. 2013 Dec 20; 9(2):254-63.
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      45. Reeve W, Terpolilli J, Melino V, Ardley J, Tian R, De Meyer S, Tiwari R, Yates R, O'Hara G, Howieson J, Ninawi M, Held B, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Ivanova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Woyke T, Kyrpides N. Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597. Stand Genomic Sci. 2013 Dec 20; 9(2):264-72.
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      46. Terpolilli J, Hill Y, Tian R, Howieson J, Bräu L, Goodwin L, Han J, Liolios K, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Genome sequence of Ensifer meliloti strain WSM1022; a highly effective microsymbiont of the model legume Medicago truncatula A17. Stand Genomic Sci. 2013 Dec 20; 9(2):315-24.
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      47. Tak N, Gehlot HS, Kaushik M, Choudhary S, Tiwari R, Tian R, Hill Y, Bräu L, Goodwin L, Han J, Liolios K, Huntemann M, Palaniappan K, Pati A, Mavromatis K, Ivanova N, Markowitz V, Woyke T, Kyrpides N, Reeve W. Genome sequence of Ensifer sp. TW10; a Tephrosia wallichii (Biyani) microsymbiont native to the Indian Thar Desert. Stand Genomic Sci. 2013 Dec 20; 9(2):304-14.
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      48. Reeve W, Terpolilli J, Melino V, Ardley J, Tian R, De Meyer S, Tiwari R, Yates R, O'Hara G, Howieson J, Ninawi M, Teshima H, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavrommatis K, Markowitz V, Ivanova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Peters L, Woyke T, Kyrpides N. Genome sequence of the lupin-nodulating Bradyrhizobium sp. strain WSM1417. Stand Genomic Sci. 2013 Dec 20; 9(2):273-82.
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      49. Khanna N, Ghosh AK, Huntemann M, Deshpande S, Han J, Chen A, Kyrpides N, Mavrommatis K, Szeto E, Markowitz V, Ivanova N, Pagani I, Pati A, Pitluck S, Nolan M, Woyke T, Teshima H, Chertkov O, Daligault H, Davenport K, Gu W, Munk C, Zhang X, Bruce D, Detter C, Xu Y, Quintana B, Reitenga K, Kunde Y, Green L, Erkkila T, Han C, Brambilla EM, Lang E, Klenk HP, Goodwin L, Chain P, Das D. Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production. Stand Genomic Sci. 2013 Dec 20; 9(2):359-69.
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      50. Reeve W, De Meyer S, Terpolilli J, Melino V, Ardley J, Rui T, Tiwari R, Howieson J, Yates R, O'Hara G, Lu M, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Szeto E, Ivanova N, Mikhailova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Peters L, Pitluck S, Woyke T, Kyrpides N. Genome sequence of the Lebeckia ambigua-nodulating "Burkholderia sprentiae" strain WSM5005(T.). Stand Genomic Sci. 2013 Dec 20; 9(2):385-94.
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      51. Walker R, Watkin E, Tian R, Bräu L, O'Hara G, Goodwin L, Han J, Reddy T, Huntemann M, Pati A, Woyke T, Mavromatis K, Markowitz V, Ivanova N, Kyrpides N, Reeve W. Genome sequence of the acid-tolerant Burkholderia sp. strain WSM2232 from Karijini National Park, Australia. Stand Genomic Sci. 2014 Jun 15; 9(3):1168-80.
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      52. Busquets A, Peña A, Gomila M, Mulet M, Mayol J, García-Valdés E, Bennasar A, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Palaniappan K, Ivanova N, Schaumberg A, Pati A, Reddy TB, Nordberg H, Woyke T, Klenk HP, Kyrpides N, Lalucat J. Draft Genome Sequence of Pseudomonas azotifigens Strain DSM 17556T (6H33bT), a Nitrogen Fixer Strain Isolated from a Compost Pile. Genome Announc. 2013; 1(6).
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      53. Markowitz VM, Chen IM, Palaniappan K, Chu K, Szeto E, Pillay M, Ratner A, Huang J, Woyke T, Huntemann M, Anderson I, Billis K, Varghese N, Mavromatis K, Pati A, Ivanova NN, Kyrpides NC. IMG 4 version of the integrated microbial genomes comparative analysis system. Nucleic Acids Res. 2014 Jan 1; 42(1):D560-7.
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      54. Markowitz VM, Chen IM, Chu K, Szeto E, Palaniappan K, Pillay M, Ratner A, Huang J, Pagani I, Tringe S, Huntemann M, Billis K, Varghese N, Tennessen K, Mavromatis K, Pati A, Ivanova NN, Kyrpides NC. IMG/M 4 version of the integrated metagenome comparative analysis system. Nucleic Acids Res. 2014 Jan 1; 42(1):D568-73.
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      55. Meier-Kolthoff JP, Lu M, Huntemann M, Lucas S, Lapidus A, Copeland A, Pitluck S, Goodwin LA, Han C, Tapia R, Pötter G, Land M, Ivanova N, Rohde M, Göker M, Detter JC, Woyke T, Kyrpides NC, Klenk HP. Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)). Stand Genomic Sci. 2013 Oct 16; 9(1):28-41.
        View in: PubMed
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