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    Tom, Lauren

    TitleResearch Assoc Principal
    SchoolLawrence Berkeley National Lab
    DepartmentBiological Systems & Eng
    Address1 Cyclotron Road
    Berkeley CA 94720
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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Handley KM, Piceno YM, Hu P, Tom L, Mason OU, Andersen GL, Jansson JK, Gilbert JA. Metabolic and spatio-taxonomic response of uncultivated seafloor bacteria following the Deepwater Horizon oil spill. ISME J. 2017 Aug 04. PMID: 28777379.
        View in: PubMed
      2. Hu P, Dubinsky EA, Probst AJ, Wang J, Sieber CMK, Tom L, Gardinali PR, Banfield JF, Atlas RM, Andersen GL. Simulation of Deepwater Horizon oil plume reveals substrate specialization within a complex community of hydrocarbon degraders. Proc Natl Acad Sci U S A. 2017 Jul 11; 114(28):7432-7437. PMID: 28652349.
        View in: PubMed
      3. Hu P, Tom L, Singh A, Thomas BC, Baker BJ, Piceno YM, Andersen GL, Banfield JF. Genome-Resolved Metagenomic Analysis Reveals Roles for Candidate Phyla and Other Microbial Community Members in Biogeochemical Transformations in Oil Reservoirs. MBio. 2016 Jan 19; 7(1):e01669-15. PMID: 26787827; PMCID: PMC4725000.
      4. Moissl-Eichinger C, Auerbach AK, Probst AJ, Mahnert A, Tom L, Piceno Y, Andersen GL, Venkateswaran K, Rettberg P, Barczyk S, Pukall R, Berg G. Quo vadis? Microbial profiling revealed strong effects of cleanroom maintenance and routes of contamination in indoor environments. Sci Rep. 2015 Mar 17; 5:9156. PMID: 25778463; PMCID: PMC4361859.
      5. Saxena G, Marzinelli EM, Naing NN, He Z, Liang Y, Tom L, Mitra S, Ping H, Joshi UM, Reuben S, Mynampati KC, Mishra S, Umashankar S, Zhou J, Andersen GL, Kjelleberg S, Swarup S. Ecogenomics reveals metals and land-use pressures on microbial communities in the waterways of a megacity. Environ Sci Technol. 2015 Feb 03; 49(3):1462-71. PMID: 25564876.
        View in: PubMed
      6. Priester JH, Van De Werfhorst LC, Ge Y, Adeleye AS, Tomar S, Tom L, Piceno YM, Andersen GL, Holden PA. Effects of TiO2 and Ag nanoparticles on polyhydroxybutyrate biosynthesis by activated sludge bacteria. Environ Sci Technol. 2014 Dec 16; 48(24):14712-20. PMID: 25409530.
        View in: PubMed
      7. Kellogg CA, Piceno YM, Tom L, DeSantis TZ, Gray MA, Andersen GL. Comparing bacterial community composition of healthy and dark spot-affected Siderastrea siderea in Florida and the Caribbean. PLoS One. 2014; 9(10):e108767. PMID: 25289937; PMCID: PMC4188562.
      8. Piceno YM, Reid FC, Tom L, Conrad ME, Bill M, Hubbard CG, Fouke BW, Graff CJ, Han J, Stringfellow WT, Hanlon JS, Hu P, Hazen TC, Andersen GL. Temperature and injection water source influence microbial community structure in four Alaskan North Slope hydrocarbon reservoirs. Front Microbiol. 2014; 5:409. PMID: 25147549; PMCID: PMC4124708.
      9. Engelbrektson A, Hubbard CG, Tom L, Boussina A, Jin YT, Wong H, Piceno YM, Carlson HK, Conrad ME, Anderson G, Coates JD. Inhibition of microbial sulfate reduction in a flow-through column system by (per)chlorate treatment. Front Microbiol. 2014; 5:315. PMID: 25071731; PMCID: PMC4092371.
      10. Krebs JE, Vaishampayan P, Probst AJ, Tom L, Marteinsson VT, Andersen GL, Venkateswaran K. Microbial community structures of novel Icelandic hot spring systems revealed by PhyloChip G3 analysis. Astrobiology. 2014 Mar; 14(3):229-40. PMID: 24588539.
        View in: PubMed
      11. Kellogg CA, Piceno YM, Tom L, DeSantis TZ, Gray MA, Zawada DG, Andersen GL. Comparing bacterial community composition between healthy and white plague-like disease states in Orbicella annularis using PhyloChip™ G3 microarrays. PLoS One. 2013; 8(11):e79801. PMID: 24278181; PMCID: PMC3835879.
      12. Briggs BR, Brodie EL, Tom L, Dong H, Jiang H, Huang Q, Wang S, Hou W, Wu G, Huang L, Hedlund BP, Zhang C, Dijkstra P, Hungate BA. Seasonal patterns in microbial communities inhabiting the hot springs of Tengchong, Yunnan Province, China. Environ Microbiol. 2014 Jun; 16(6):1579-91. PMID: 24148100.
        View in: PubMed
      13. Dubinsky EA, Conrad ME, Chakraborty R, Bill M, Borglin SE, Hollibaugh JT, Mason OU, M Piceno Y, Reid FC, Stringfellow WT, Tom L, Hazen TC, Andersen GL. Succession of hydrocarbon-degrading bacteria in the aftermath of the deepwater horizon oil spill in the gulf of Mexico. Environ Sci Technol. 2013 Oct 01; 47(19):10860-7. PMID: 23937111.
        View in: PubMed
      14. Mello A, Ding GC, Piceno YM, Napoli C, Tom L, DeSantis TZ, Andersen GL, Smalla K, Bonfante P. Truffle brûlés have an impact on the diversity of soil bacterial communities. PLoS One. 2013; 8(4):e61945. PMID: 23667413; PMCID: PMC3640031.
      15. Beazley MJ, Martinez RJ, Rajan S, Powell J, Piceno YM, Tom L, Andersen GL, Hazen TC, Van Nostrand JD, Zhou J, Mortazavi B, Sobecky PA. Microbial community analysis of a coastal salt marsh affected by the Deepwater Horizon oil spill. PLoS One. 2012; 7(7):e41305. PMID: 22815990; PMCID: PMC3399869.
      16. Mason OU, Hazen TC, Borglin S, Chain PS, Dubinsky EA, Fortney JL, Han J, Holman HY, Hultman J, Lamendella R, Mackelprang R, Malfatti S, Tom L, Tringe SG, Woyke T, Zhou J, Rubin EM, Jansson JK. Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill. ISME J. 2012 Sep; 6(9):1715-27. PMID: 22717885; PMCID: PMC3498917.
      17. Korves TM, Piceno YM, Tom L, Desantis TZ, Jones BW, Andersen GL, Hwang GM. Bacterial communities in commercial aircraft high-efficiency particulate air (HEPA) filters assessed by PhyloChip analysis. Indoor Air. 2013 Feb; 23(1):50-61. PMID: 22563927.
        View in: PubMed
      18. De Jesús-Laboy KM, Godoy-Vitorino F, Piceno YM, Tom L, Pantoja-Feliciano IG, Rivera-Rivera MJ, Andersen GL, Domínguez-Bello MG. Comparison of the fecal microbiota in feral and domestic goats. Genes (Basel). 2011 Dec 21; 3(1):1-18. PMID: 24704840; PMCID: PMC3899958.
      19. García-Amado MA, Godoy-Vitorino F, Piceno YM, Tom L, Andersen GL, Herrera EA, Domínguez-Bello MG. Bacterial diversity in the cecum of the world's largest living rodent (Hydrochoerus hydrochaeris). Microb Ecol. 2012 May; 63(4):719-25. PMID: 22083250.
        View in: PubMed
      20. Kellogg CA, Piceno YM, Tom L, DeSantis TZ, Zawada DG, Andersen GL. PhyloChip™ microarray comparison of sampling methods used for coral microbial ecology. J Microbiol Methods. 2012 Jan; 88(1):103-9. PMID: 22085912.
        View in: PubMed
      21. Lu Z, Deng Y, Van Nostrand JD, He Z, Voordeckers J, Zhou A, Lee YJ, Mason OU, Dubinsky EA, Chavarria KL, Tom L, Fortney JL, Lamendella R, Jansson JK, D'haeseleer P, Hazen TC, Zhou J. Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume. ISME J. 2012 Feb; 6(2):451-60. PMID: 21814288; PMCID: PMC3260509.
      22. DeAngelis KM, Wu CH, Beller HR, Brodie EL, Chakraborty R, DeSantis TZ, Fortney JL, Hazen TC, Osman SR, Singer ME, Tom L, Andersen GL. PCR amplification-independent methods for detection of microbial communities by the high-density microarray PhyloChip. Appl Environ Microbiol. 2011 Sep; 77(18):6313-22. PMID: 21764955; PMCID: PMC3187179.
      23. Chourey K, Jansson J, VerBerkmoes N, Shah M, Chavarria KL, Tom L, Brodie EL, Hettich RL. Direct cellular lysis/protein extraction protocol for soil metaproteomics. J Proteome Res. 2010 Dec 03; 9(12):6615-22. PMID: 20954746.
        View in: PubMed
      24. Hazen TC, Dubinsky EA, DeSantis TZ, Andersen GL, Piceno YM, Singh N, Jansson JK, Probst A, Borglin SE, Fortney JL, Stringfellow WT, Bill M, Conrad ME, Tom L, Chavarria KL, Alusi TR, Lamendella R, Joyner DC, Spier C, Baelum J, Auer M, Zemla ML, Chakraborty R, Sonnenthal EL, D'haeseleer P, Holman HY, Osman S, Lu Z, Van Nostrand JD, Deng Y, Zhou J, Mason OU. Deep-sea oil plume enriches indigenous oil-degrading bacteria. Science. 2010 Oct 08; 330(6001):204-8. PMID: 20736401.
        View in: PubMed
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