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    22833 Publications
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    24 Edited Profiles

    Beller, Harry

    TitleGeological Senior Scientist
    SchoolLawrence Berkeley National Lab
    DepartmentEarth Sciences
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone510/486-7321

       Bibliographic 
       Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can sign in to make corrections and additions, or contact us for help.
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      1. Beller HR, Lee TS, Katz L. Natural products as biofuels and bio-based chemicals: fatty acids and isoprenoids. Nat Prod Rep. 2015 Sep 23; 32(10):1508-26.
        View in: PubMed
      2. Varadharajan C, Han R, Beller HR, Yang L, Marcus MA, Michel M, Nico PS. Characterization of Chromium Bioremediation Products in Flow-Through Column Sediments Using Micro-X-ray Fluorescence and X-ray Absorption Spectroscopy. J Environ Qual. 2015 May; 44(3):729-38.
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      3. Goh EB, Baidoo EE, Burd H, Lee TS, Keasling JD, Beller HR. Substantial improvements in methyl ketone production in E. coli and insights on the pathway from in vitro studies. Metab Eng. 2014 Nov; 26:67-76.
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      4. Beller HR, Yang L, Varadharajan C, Han R, Lim HC, Karaoz U, Molins S, Marcus MA, Brodie EL, Steefel CI, Nico PS. Divergent Aquifer Biogeochemical Systems Converge on Similar and Unexpected Cr(VI) Reduction Products. Environ Sci Technol. 2014 Sep 16; 48(18):10699-706.
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      5. Bi C, Su P, Müller J, Yeh YC, Chhabra SR, Beller HR, Singer SW, Hillson NJ. Development of a broad-host synthetic biology toolbox for ralstonia eutropha and its application to engineering hydrocarbon biofuel production. Microb Cell Fact. 2013; 12:107.
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      6. Javidpour P, Pereira JH, Goh EB, McAndrew RP, Ma SM, Friedland GD, Keasling JD, Chhabra SR, Adams PD, Beller HR. Biochemical and Structural Studies of NADH-Dependent FabG Used To Increase the Bacterial Production of Fatty Acids under Anaerobic Conditions. Appl Environ Microbiol. 2014 Jan; 80(2):497-505.
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      7. Beller HR, Zhou P, Legler TC, Chakicherla A, Kane S, Letain TE, A O'Day P. Genome-enabled studies of anaerobic, nitrate-dependent iron oxidation in the chemolithoautotrophic bacterium Thiobacillus denitrificans. Front Microbiol. 2013; 4:249.
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      8. Müller J, MacEachran D, Burd H, Sathitsuksanoh N, Bi C, Yeh YC, Lee TS, Hillson NJ, Chhabra SR, Singer SW, Beller HR. Engineering of Ralstonia eutropha H16 for autotrophic and heterotrophic production of methyl ketones. Appl Environ Microbiol. 2013 Jul; 79(14):4433-9.
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      9. Yeh YC, Müller J, Bi C, Hillson NJ, Beller HR, Chhabra SR, Singer SW. Functionalizing bacterial cell surfaces with a phage protein. Chem Commun (Camb). 2013 Jan 30; 49(9):910-2.
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      10. Beller HR, Han R, Karaoz U, Lim H, Brodie EL. Genomic and physiological characterization of the chromate-reducing, aquifer-derived Firmicute Pelosinus sp. strain HCF1. Appl Environ Microbiol. 2013 Jan; 79(1):63-73.
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      11. Pereira JH, Goh EB, Keasling JD, Beller HR, Adams PD. Structure of FabH and factors affecting the distribution of branched fatty acids in Micrococcus luteus. Acta Crystallogr D Biol Crystallogr. 2012 Oct; 68(Pt 10):1320-8.
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      12. Han R, Qin L, Brown ST, Christensen JN, Beller HR. Differential isotopic fractionation during Cr(VI) reduction by an aquifer-derived bacterium under aerobic versus denitrifying conditions. Appl Environ Microbiol. 2012 Apr; 78(7):2462-4.
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      13. Beller HR, Legler TC, Kane SR. Genetic manipulation of the obligate chemolithoautotrophic bacterium Thiobacillus denitrificans. Methods Mol Biol. 2012; 881:99-136.
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      14. Goh EB, Baidoo EE, Keasling JD, Beller HR. Engineering of bacterial methyl ketone synthesis for biofuels. Appl Environ Microbiol. 2012 Jan; 78(1):70-80.
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      15. Chertkov O, Copeland A, Lucas S, Lapidus A, Berry KW, Detter JC, Del Rio TG, Hammon N, Dalin E, Tice H, Pitluck S, Richardson P, Bruce D, Goodwin L, Han C, Tapia R, Saunders E, Schmutz J, Brettin T, Larimer F, Land M, Hauser L, Spring S, Rohde M, Kyrpides NC, Ivanova N, Göker M, Beller HR, Klenk HP, Woyke T. Complete genome sequence of Tolumonas auensis type strain (TA 4). Stand Genomic Sci. 2011 Oct 15; 5(1):112-20.
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      16. Chhabra SR, Butland G, Elias DA, Chandonia JM, Fok OY, Juba TR, Gorur A, Allen S, Leung CM, Keller KL, Reveco S, Zane GM, Semkiw E, Prathapam R, Gold B, Singer M, Ouellet M, Szakal ED, Jorgens D, Price MN, Witkowska HE, Beller HR, Arkin AP, Hazen TC, Biggin MD, Auer M, Wall JD, Keasling JD. Generalized schemes for high-throughput manipulation of the Desulfovibrio vulgaris genome. Appl Environ Microbiol. 2011 Nov; 77(21):7595-604.
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      17. DeAngelis KM, Wu CH, Beller HR, Brodie EL, Chakraborty R, DeSantis TZ, Fortney JL, Hazen TC, Osman SR, Singer ME, Tom LM, Andersen GL. PCR amplification-independent methods for detection of microbial communities by the high-density microarray PhyloChip. Appl Environ Microbiol. 2011 Sep; 77(18):6313-22.
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      18. Beller HR, Goh EB, Keasling JD. Definitive alkene identification needed for in vitro studies with ole (olefin biosynthesis) proteins. J Biol Chem. 2011 Jul 1; 286(26):le11; author reply le12-3.
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      19. Han R, Geller JT, Yang L, Brodie EL, Chakraborty R, Larsen JT, Beller HR. Physiological and transcriptional studies of Cr(VI) reduction under aerobic and denitrifying conditions by an aquifer-derived pseudomonad. Environ Sci Technol. 2010 Oct 1; 44(19):7491-7.
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      20. Beller HR, Goh EB, Keasling JD. Genes involved in long-chain alkene biosynthesis in Micrococcus luteus. Appl Environ Microbiol. 2010 Feb; 76(4):1212-23.
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      21. Young M, Artsatbanov V, Beller HR, Chandra G, Chater KF, Dover LG, Goh EB, Kahan T, Kaprelyants AS, Kyrpides N, Lapidus A, Lowry SR, Lykidis A, Mahillon J, Markowitz V, Mavromatis K, Mukamolova GV, Oren A, Rokem JS, Smith MC, Young DI, Greenblatt CL. Genome sequence of the Fleming strain of Micrococcus luteus, a simple free-living actinobacterium. J Bacteriol. 2010 Feb; 192(3):841-60.
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      22. Beller HR, Kane SR, Legler TC, McKelvie JR, Lollar BS, Pearson F, Balser L, Mackay DM. Comparative assessments of benzene, toluene, and xylene natural attenuation by quantitative polymerase chain reaction analysis of a catabolic gene, signature metabolites, and compound-specific isotope analysis. Environ Sci Technol. 2008 Aug 15; 42(16):6065-72.
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      23. Beller HR, Legler TC, Bourguet F, Letain TE, Kane SR, Coleman MA. Identification of c-type cytochromes involved in anaerobic, bacterial U(IV) oxidation. Biodegradation. 2009 Feb; 20(1):45-53.
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      24. Kunapuli U, Griebler C, Beller HR, Meckenstock RU. Identification of intermediates formed during anaerobic benzene degradation by an iron-reducing enrichment culture. Environ Microbiol. 2008 Jul; 10(7):1703-12.
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      25. Letain TE, Kane SR, Legler TC, Salazar EP, Agron PG, Beller HR. Development of a genetic system for the chemolithoautotrophic bacterium Thiobacillus denitrificans. Appl Environ Microbiol. 2007 May; 73(10):3265-71.
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      26. Beller HR, Letain TE, Chakicherla A, Kane SR, Legler TC, Coleman MA. Whole-genome transcriptional analysis of chemolithoautotrophic thiosulfate oxidation by Thiobacillus denitrificans under aerobic versus denitrifying conditions. J Bacteriol. 2006 Oct; 188(19):7005-15.
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      27. Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP. The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans. J Bacteriol. 2006 Feb; 188(4):1473-88.
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      28. McKelvie JR, Lindstrom JE, Beller HR, Richmond SA, Sherwood Lollar B. Analysis of anaerobic BTX biodegradation in a subarctic aquifer using isotopes and benzylsuccinates. J Contam Hydrol. 2005 Dec; 81(1-4):167-86.
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      29. Ulrich AC, Beller HR, Edwards EA. Metabolites detected during biodegradation of 13C6-benzene in nitrate-reducing and methanogenic enrichment cultures. Environ Sci Technol. 2005 Sep 1; 39(17):6681-91.
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      30. Beller HR. Anaerobic, nitrate-dependent oxidation of U(IV) oxide minerals by the chemolithoautotrophic bacterium Thiobacillus denitrificans. Appl Environ Microbiol. 2005 Apr; 71(4):2170-4.
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      31. Reusser DE, Istok JD, Beller HR, Field JA. In situ transformation of deuterated toluene and xylene to benzylsuccinic acid analogues in BTEX-contaminated aquifers. Environ Sci Technol. 2002 Oct 1; 36(19):4127-34.
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      32. Beller HR, Kane SR, Legler TC, Alvarez PJ. A real-time polymerase chain reaction method for monitoring anaerobic, hydrocarbon-degrading bacteria based on a catabolic gene. Environ Sci Technol. 2002 Sep 15; 36(18):3977-84.
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      33. Beller HR. Analysis of benzylsuccinates in groundwater by liquid chromatography/tandem mass spectrometry and its use for monitoring in situ BTEX biodegradaton. Environ Sci Technol. 2002 Jun 15; 36(12):2724-8.
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      34. Beller HR, Tiemeier K. Use of liquid chromatography/tandem mass spectrometry to detect distinctive indicators of in situ RDX transformation in contaminated groundwater. Environ Sci Technol. 2002 May 1; 36(9):2060-6.
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      35. Beller HR. Anaerobic biotransformation of RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) by aquifer bacteria using hydrogen as the sole electron donor. Water Res. 2002 May; 36(10):2533-40.
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      36. Kane SR, Beller HR, Legler TC, Anderson RT. Biochemical and genetic evidence of benzylsuccinate synthase in toluene-degrading, ferric iron-reducing Geobacter metallireducens. Biodegradation. 2002; 13(2):149-54.
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      37. Kane SR, Beller HR, Legler TC, Koester CJ, Pinkart HC, Halden RU, Happel AM. Aerobic biodegradation of methyl tert-butyl ether by aquifer bacteria from leaking underground storage tank sites. Appl Environ Microbiol. 2001 Dec; 67(12):5824-9.
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      38. Beller HR, Edwards EA. Anaerobic toluene activation by benzylsuccinate synthase in a highly enriched methanogenic culture. Appl Environ Microbiol. 2000 Dec; 66(12):5503-5.
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      39. Beller HR. Metabolic indicators for detecting in situ anaerobic alkylbenzene degradation. Biodegradation. 2000; 11(2-3):125-39.
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      40. Krieger CJ, Beller HR, Reinhard M, Spormann AM. Initial reactions in anaerobic oxidation of m-xylene by the denitrifying bacterium Azoarcus sp. strain T. J Bacteriol. 1999 Oct; 181(20):6403-10.
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      41. Beller HR, Spormann AM. Substrate range of benzylsuccinate synthase from Azoarcus sp. strain T. FEMS Microbiol Lett. 1999 Sep 1; 178(1):147-53.
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      42. Beller HR, Spormann AM. Analysis of the novel benzylsuccinate synthase reaction for anaerobic toluene activation based on structural studies of the product. J Bacteriol. 1998 Oct; 180(20):5454-7.
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      43. Beller HR, Spormann AM. Benzylsuccinate Formation as a Means of Anaerobic Toluene Activation by Sulfate-Reducing Strain PRTOL1. Appl Environ Microbiol. 1997 Sep; 63(9):3729-31.
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      44. Beller HR, Spormann AM. Anaerobic activation of toluene and o-xylene by addition to fumarate in denitrifying strain T. J Bacteriol. 1997 Feb; 179(3):670-6.
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      45. Beller HR, Spormann AM, Sharma PK, Cole JR, Reinhard M. Isolation and characterization of a novel toluene-degrading, sulfate-reducing bacterium. Appl Environ Microbiol. 1996 Apr; 62(4):1188-96.
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      46. Beller HR, Ding WH, Reinhard M. Byproducts of anaerobic alkylbenzene metabolism useful as indicators of in situ bioremediation. Environ Sci Technol. 1995 Nov; 29(11):2864-70.
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      47. Beller HR, Reinhard M. The role of iron in enhancing anaerobic toluene degradation in sulfate-reducing enrichment cultures. Microb Ecol. 1995 Jul; 30(1):105-14.
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      48. Beller HR, Reinhard M, Grbic-Galic D. Metabolic by-products of anaerobic toluene degradation by sulfate-reducing enrichment cultures. Appl Environ Microbiol. 1992 Sep; 58(9):3192-5.
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      49. Beller HR, Grbic-Galic D, Reinhard M. Microbial degradation of toluene under sulfate-reducing conditions and the influence of iron on the process. Appl Environ Microbiol. 1992 Mar; 58(3):786-93.
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      50. Beller HR, Simoneit BR. Hexachlorophene distributions in estuarine sediments. Bull Environ Contam Toxicol. 1988 Nov; 41(5):645-50.
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