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    Chang, Hang

    TitleComputer Research Sci/Engr
    SchoolLawrence Berkeley National Lab
    DepartmentBiological Systems & Eng
    Address1 Cyclotron Road
    Berkeley CA 94720
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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Han J, Wang Y, Cai W, Borowsky A, Parvin B, Chang H. Integrative Analysis of Cellular Morphometric Context Reveals Clinically Relevant Signatures in Lower Grade Glioma. Med Image Comput Comput Assist Interv. 2016 Oct; 9900:72-80. PMID: 28018994.
        View in: PubMed
      2. Zhong C, Han J, Borowsky A, Parvin B, Wang Y, Chang H. When machine vision meets histology: A comparative evaluation of model architecture for classification of histology sections. Med Image Anal. 2017 Jan; 35:530-543. PMID: 27644083.
        View in: PubMed
      3. Bilgin CC, Fontenay G, Cheng Q, Chang H, Han J, Parvin B. BioSig3D: High Content Screening of Three-Dimensional Cell Culture Models. PLoS One. 2016; 11(3):e0148379. PMID: 26978075; PMCID: PMC4792475.
      4. Zhou Y, Chang H, Barner KE, Parvin B. NUCLEI SEGMENTATION VIA SPARSITY CONSTRAINED CONVOLUTIONAL REGRESSION. Proc IEEE Int Symp Biomed Imaging. 2015 Apr; 2015:1284-1287. PMID: 28101301.
        View in: PubMed
      5. Chang H, Wen Q, Parvin B. Coupled Segmentation of Nuclear and Membrane-bound Macromolecules through Voting and Multiphase Level Set. Pattern Recognit. 2015 Mar 01; 48(3):882-893. PMID: 25530633.
        View in: PubMed
      6. Chang H, Parvin B. Classification of 3D Multicellular Organization in Phase Microscopy for High Throughput Screening of Therapeutic Targets. Proc IEEE Workshop Appl Comput Vis. 2015 Jan; 2015:436-441. PMID: 25729338.
        View in: PubMed
      7. Chang H, Zhou Y, Borowsky A, Barner K, Spellman P, Parvin B. Stacked Predictive Sparse Decomposition for Classification of Histology Sections. Int J Comput Vis. 2015 May; 113(1):3-18. PMID: 27721567.
        View in: PubMed
      8. Bilgin CC, Kim S, Leung E, Chang H, Parvin B. Integrated profiling of three dimensional cell culture models and 3D microscopy. Bioinformatics. 2013 Dec 01; 29(23):3087-93. PMID: 24045773; PMCID: PMC3834800.
      9. Chang H, Borowsky A, Spellman P, Parvin B. Classification of Tumor Histology via Morphometric Context. Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit. 2013 Jun 23; 2013. PMID: 24319324.
        View in: PubMed
      10. Nayak N, Chang H, Borowsky A, Spellman P, Parvin B. CLASSIFICATION OF TUMOR HISTOPATHOLOGY VIA SPARSE FEATURE LEARNING. Proc IEEE Int Symp Biomed Imaging. 2013 Apr; 2013. PMID: 24319533.
        View in: PubMed
      11. Chang H, Zhou Y, Spellman P, Parvin B. Stacked Predictive Sparse Coding for Classification of Distinct Regions of Tumor Histopathology. Proc IEEE Int Conf Comput Vis. 2013; 169-176. PMID: 24770492.
        View in: PubMed
      12. Chang H, Nayak N, Spellman PT, Parvin B. Characterization of tissue histopathology via predictive sparse decomposition and spatial pyramid matching. Med Image Comput Comput Assist Interv. 2013; 16(Pt 2):91-8. PMID: 24579128; PMCID: PMC3998828.
      13. Chang H, Han J, Borowsky A, Loss L, Gray JW, Spellman PT, Parvin B. Invariant delineation of nuclear architecture in glioblastoma multiforme for clinical and molecular association. IEEE Trans Med Imaging. 2013 Apr; 32(4):670-82. PMID: 23221815; PMCID: PMC3728287.
      14. Loss LA, Bebis G, Chang H, Auer M, Sarkar P, Parvin B. Automatic Segmentation and Quantification of Filamentous Structures in Electron Tomography. ACM BCB. 2012 Oct; 2012:170-177. PMID: 28090597.
        View in: PubMed
      15. Chang H, Han J, Spellman PT, Parvin B. Multireference level set for the characterization of nuclear morphology in glioblastoma multiforme. IEEE Trans Biomed Eng. 2012 Dec; 59(12):3460-7. PMID: 22987497; PMCID: PMC3728286.
      16. Nath S, Spencer VA, Han J, Chang H, Zhang K, Fontenay GV, Anderson C, Hyman JM, Nilsen-Hamilton M, Chang YT, Parvin B. Identification of fluorescent compounds with non-specific binding property via high throughput live cell microscopy. PLoS One. 2012; 7(1):e28802. PMID: 22242152; PMCID: PMC3252290.
      17. Chang H, Fontenay GV, Han J, Cong G, Baehner FL, Gray JW, Spellman PT, Parvin B. Morphometic analysis of TCGA glioblastoma multiforme. BMC Bioinformatics. 2011 Dec 20; 12:484. PMID: 22185703; PMCID: PMC3271112.
      18. Han J, Chang H, Loss L, Zhang K, Baehner FL, Gray JW, Spellman P, Parvin B. COMPARISON OF SPARSE CODING AND KERNEL METHODS FOR HISTOPATHOLOGICAL CLASSIFICATION OF GLIOBASTOMA MULTIFORME. Proc IEEE Int Symp Biomed Imaging. 2011 Jun 09; 2011:711-714. PMID: 23243485.
        View in: PubMed
      19. Groesser T, Chang H, Fontenay G, Chen J, Costes SV, Helen Barcellos-Hoff M, Parvin B, Rydberg B. Persistence of ?-H2AX and 53BP1 foci in proliferating and non-proliferating human mammary epithelial cells after exposure to ?-rays or iron ions. Int J Radiat Biol. 2011 Jul; 87(7):696-710. PMID: 21271785.
        View in: PubMed
      20. Han J, Chang H, Giricz O, Lee GY, Baehner FL, Gray JW, Bissell MJ, Kenny PA, Parvin B. Molecular predictors of 3D morphogenesis by breast cancer cell lines in 3D culture. PLoS Comput Biol. 2010 Feb 26; 6(2):e1000684. PMID: 20195492; PMCID: PMC2829039.
      21. Han J, Chang H, Andarawewa K, Yaswen P, Barcellos-Hoff MH, Parvin B. Multidimensional profiling of cell surface proteins and nuclear markers. IEEE/ACM Trans Comput Biol Bioinform. 2010 Jan-Mar; 7(1):80-90. PMID: 20150670.
        View in: PubMed
      22. Han J, Chang H, Fontenay G, Wang NJ, Gray JW, Parvin B. MORPHOMETRIC SUBTYPING FOR A PANEL OF BREAST CANCER CELL LINES. Proc IEEE Int Symp Biomed Imaging. 2009 Jun 28; 6:791-794. PMID: 20011457.
        View in: PubMed
      23. Chang H, DeFilippis RA, Tlsty TD, Parvin B. Graphical methods for quantifying macromolecules through bright field imaging. Bioinformatics. 2009 Apr 15; 25(8):1070-5. PMID: 18703588; PMCID: PMC2666809.
      24. Parvin B, Yang Q, Han J, Chang H, Rydberg B, Barcellos-Hoff MH. Iterative voting for inference of structural saliency and characterization of subcellular events. IEEE Trans Image Process. 2007 Mar; 16(3):615-23. PMID: 17357723.
        View in: PubMed
      25. Chang H, Yang Q, Parvin B. Segmentation of heterogeneous blob objects through voting and level set formulation. Pattern Recognit Lett. 2007; 28(13):1781-1787. PMID: 19774202.
        View in: PubMed

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