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    Dilworth, David

    TitleResearch Assoc Sr
    SchoolLawrence Berkeley National Lab
    DepartmentJoint Genome Institute
    Address1 Cyclotron Road
    Berkeley CA 94720
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      Collapse Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Herricks T, Dilworth D, Mast FD, Li S, Smith JJ, Ratushny AV, Aitchison JD. One-Cell Doubling Evaluation by Living Arrays of Yeast, ODELAY! G3 (Bethesda). 2017 Jan 05; 7(1):279-288. PMID: 27856698.
        View in: PubMed
      2. Mast FD, Jamakhandi A, Saleem RA, Dilworth D, Rogers RS, Rachubinski RA, Aitchison JD. Peroxins Pex30 and Pex29 Dynamically Associate with Reticulons to Regulate Peroxisome Biogenesis from the Endoplasmic Reticulum. J Biol Chem. 2016 Jul 22; 291(30):15408-27. PMID: 27129769.
        View in: PubMed
      3. Hakhverdyan Z, Domanski M, Hough LE, Oroskar AA, Oroskar AR, Keegan S, Dilworth D, Molloy KR, Sherman V, Aitchison JD, Fenyö D, Chait BT, Jensen TH, Rout MP, LaCava J. Rapid, optimized interactomic screening. Nat Methods. 2015 Jun; 12(6):553-60. PMID: 25938370; PMCID: PMC4449307.
      4. Dilworth D, Nelson CJ. Rapid identification of chemical genetic interactions in Saccharomyces cerevisiae. J Vis Exp. 2015 Apr 05; (98):e52345. PMID: 25867090.
        View in: PubMed
      5. Gudavicius G, Dilworth D, Serpa JJ, Sessler N, Petrotchenko EV, Borchers CH, Nelson CJ. The prolyl isomerase, FKBP25, interacts with RNA-engaged nucleolin and the pre-60S ribosomal subunit. RNA. 2014 Jul; 20(7):1014-22. PMID: 24840943; PMCID: PMC4114681.
      6. Mirzaei H, Knijnenburg TA, Kim B, Robinson M, Picotti P, Carter GW, Li S, Dilworth D, Eng JK, Aitchison JD, Shmulevich I, Galitski T, Aebersold R, Ranish J. Systematic measurement of transcription factor-DNA interactions by targeted mass spectrometry identifies candidate gene regulatory proteins. Proc Natl Acad Sci U S A. 2013 Feb 26; 110(9):3645-50. PMID: 23388641; PMCID: PMC3587231.
      7. Jung S, Smith JJ, von Haller PD, Dilworth D, Sitko KA, Miller LR, Saleem RA, Goodlett DR, Aitchison JD. Global analysis of condition-specific subcellular protein distribution and abundance. Mol Cell Proteomics. 2013 May; 12(5):1421-35. PMID: 23349476; PMCID: PMC3650349.
      8. Labelle-Dumais C, Dilworth D, Harrington EP, de Leau M, Lyons D, Kabaeva Z, Manzini MC, Dobyns WB, Walsh CA, Michele DE, Gould DB. COL4A1 mutations cause ocular dysgenesis, neuronal localization defects, and myopathy in mice and Walker-Warburg syndrome in humans. PLoS Genet. 2011 May; 7(5):e1002062. PMID: 21625620; PMCID: PMC3098190.
      9. Saleem RA, Long-O'Donnell R, Dilworth D, Armstrong AM, Jamakhandi AP, Wan Y, Knijnenburg TA, Niemistö A, Boyle J, Rachubinski RA, Shmulevich I, Aitchison JD. Genome-wide analysis of effectors of peroxisome biogenesis. PLoS One. 2010 Aug 04; 5(8):e11953. PMID: 20694151; PMCID: PMC2915925.
      10. Saleem RA, Rogers RS, Ratushny AV, Dilworth D, Shannon PT, Shteynberg D, Wan Y, Moritz RL, Nesvizhskii AI, Rachubinski RA, Aitchison JD. Integrated phosphoproteomics analysis of a signaling network governing nutrient response and peroxisome induction. Mol Cell Proteomics. 2010 Sep; 9(9):2076-88. PMID: 20395639; PMCID: PMC2938103.
      11. Dilworth D, Saleem RA, Rogers RS, Mirzaei H, Boyle J, Aitchison JD. QTIPS: a novel method of unsupervised determination of isotopic amino acid distribution in SILAC experiments. J Am Soc Mass Spectrom. 2010 Aug; 21(8):1417-22. PMID: 20451407; PMCID: PMC2914207.
      12. Bai X, Dilworth D, Weng YC, Gould DB. Developmental distribution of collagen IV isoforms and relevance to ocular diseases. Matrix Biol. 2009 May; 28(4):194-201. PMID: 19275937; PMCID: PMC4749355.
      13. Dilworth D, Tackett AJ, Rogers RS, Yi EC, Christmas RH, Smith JJ, Siegel AF, Chait BT, Wozniak RW, Aitchison JD. The mobile nucleoporin Nup2p and chromatin-bound Prp20p function in endogenous NPC-mediated transcriptional control. J Cell Biol. 2005 Dec 19; 171(6):955-65. PMID: 16365162; PMCID: PMC2171315.
      14. Scott RJ, Lusk CP, Dilworth D, Aitchison JD, Wozniak RW. Interactions between Mad1p and the nuclear transport machinery in the yeast Saccharomyces cerevisiae. Mol Biol Cell. 2005 Sep; 16(9):4362-74. PMID: 16000377; PMCID: PMC1196344.
      15. Sydorskyy Y, Dilworth D, Halloran B, Yi EC, Makhnevych T, Wozniak RW, Aitchison JD. Nop53p is a novel nucleolar 60S ribosomal subunit biogenesis protein. Biochem J. 2005 Jun 15; 388(Pt 3):819-26. PMID: 15686447; PMCID: PMC1183461.
      16. Tackett AJ, Dilworth D, Davey MJ, O'Donnell M, Aitchison JD, Rout MP, Chait BT. Proteomic and genomic characterization of chromatin complexes at a boundary. J Cell Biol. 2005 Apr 11; 169(1):35-47. PMID: 15824130; PMCID: PMC2171912.
      17. Sydorskyy Y, Dilworth D, Yi EC, Goodlett DR, Wozniak RW, Aitchison JD. Intersection of the Kap123p-mediated nuclear import and ribosome export pathways. Mol Cell Biol. 2003 Mar; 23(6):2042-54. PMID: 12612077; PMCID: PMC149464.
      18. Smith JJ, Marelli M, Christmas RH, Vizeacoumar FJ, Dilworth D, Ideker T, Galitski T, Dimitrov K, Rachubinski RA, Aitchison JD. Transcriptome profiling to identify genes involved in peroxisome assembly and function. J Cell Biol. 2002 Jul 22; 158(2):259-71. PMID: 12135984; PMCID: PMC2173120.
      19. Dilworth D, Suprapto A, Padovan JC, Chait BT, Wozniak RW, Rout MP, Aitchison JD. Nup2p dynamically associates with the distal regions of the yeast nuclear pore complex. J Cell Biol. 2001 Jun 25; 153(7):1465-78. PMID: 11425876; PMCID: PMC2150724.
      20. Marelli M, Dilworth D, Wozniak RW, Aitchison JD. The dynamics of karyopherin-mediated nuclear transport. Biochem Cell Biol. 2001; 79(5):603-12. PMID: 11716302.
        View in: PubMed

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