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    22833 Publications
    3073 Total Profiles
    24 Edited Profiles

    Herr, Amy

    TitleBiological Faculty Engineer
    SchoolLawrence Berkeley National Lab
    DepartmentPhysical Biosciences
    Address1 Cyclotron Road
    Berkeley CA 94720
    Phone510/666-3396

       Bibliographic 
       Publications
      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can sign in to make corrections and additions, or contact us for help.
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      1. Vlassakis J, Herr AE. Effect of Polymer Hydration State on In-Gel Immunoassays. Anal Chem. 2015 Nov 3; 87(21):11030-8.
        View in: PubMed
      2. Duncombe TA, Tentori AM, Herr AE. Microfluidics: reframing biological enquiry. Nat Rev Mol Cell Biol. 2015 Aug 21; 16(9):554-67.
        View in: PubMed
      3. Lin R, Skandarajah A, Gerver RE, Neira HD, Fletcher DA, Herr AE. A lateral electrophoretic flow diagnostic assay. Lab Chip. 2015 Mar 3; 15(6):1488-96.
        View in: PubMed
      4. Sinkala E, Herr AE. Single-Cell Western Blotting. Methods Mol Biol. 2015; 1346:1-9.
        View in: PubMed
      5. Chung M, Kim D, Herr AE. Polymer sieving matrices in microanalytical electrophoresis. Analyst. 2014 Oct 15; 139(22):5635-54.
        View in: PubMed
      6. Gerver RE, Herr AE. Microfluidic Western blotting of low-molecular-mass proteins. Anal Chem. 2014 Nov 4; 86(21):10625-32.
        View in: PubMed
      7. Pan Y, Duncombe TA, Kellenberger CA, Hammond MC, Herr AE. High-throughput electrophoretic mobility shift assays for quantitative analysis of molecular binding reactions. Anal Chem. 2014 Oct 21; 86(20):10357-64.
        View in: PubMed
      8. Kang CC, Lin JM, Xu Z, Kumar S, Herr AE. Single-cell Western blotting after whole-cell imaging to assess cancer chemotherapeutic response. Anal Chem. 2014 Oct 21; 86(20):10429-36.
        View in: PubMed
      9. Hughes AJ, Spelke DP, Xu Z, Kang CC, Schaffer DV, Herr AE. Single-cell western blotting. Nat Methods. 2014 Jul; 11(7):749-55.
        View in: PubMed
      10. Pan Y, Karns K, Herr AE. Microfluidic electrophoretic mobility shift assays for quantitative biochemical analysis. Electrophoresis. 2014 Aug; 35(15):2078-90.
        View in: PubMed
      11. Tentori AM, Herr AE. Performance implications of chemical mobilization after microchannel IEF. Electrophoresis. 2014 May; 35(10):1453-60.
        View in: PubMed
      12. Kapil MA, Herr AE. Binding Kinetic Rates Measured via Electrophoretic Band Crossing in a Pseudohomogeneous Format. Anal Chem. 2014 Mar 4; 86(5):2601-9.
        View in: PubMed
      13. Araz MK, Apori AA, Salisbury CM, Herr AE. Microfluidic barcode assay for antibody-based confirmatory diagnostics. Lab Chip. 2013 Oct 7; 13(19):3910-20.
        View in: PubMed
      14. Herr AE. Disruptive by design: a perspective on engineering in analytical chemistry. Anal Chem. 2013 Aug 20; 85(16):7622-8.
        View in: PubMed
      15. Chung M, Kim D, Herr AE. Microchamber Western blotting using poly-L-lysine conjugated polyacrylamide gel for blotting of sodium dodecyl sulfate coated proteins. Anal Chem. 2013 Aug 20; 85(16):7753-61.
        View in: PubMed
      16. Kim D, Herr AE. Protein immobilization techniques for microfluidic assays. Biomicrofluidics. 2013; 7(4):41501.
        View in: PubMed
      17. Araz MK, Tentori AM, Herr AE. Microfluidic multiplexing in bioanalyses. J Lab Autom. 2013 Oct; 18(5):350-66.
        View in: PubMed
      18. Duncombe TA, Herr AE. Photopatterned free-standing polyacrylamide gels for microfluidic protein electrophoresis. Lab Chip. 2013 Jun 7; 13(11):2115-23.
        View in: PubMed
      19. Tentori AM, Hughes AJ, Herr AE. Microchamber integration unifies distinct separation modes for two-dimensional electrophoresis. Anal Chem. 2013 May 7; 85(9):4538-45.
        View in: PubMed
      20. Tia SQ, Brown K, Chen D, Herr AE. Protein post-translational modification analyses using on-chip immunoprobed isoelectric focusing. Anal Chem. 2013 Mar 5; 85(5):2882-90.
        View in: PubMed
      21. Apori AA, Brozynski MN, El-Sayed IH, Herr AE. Microfluidic validation of diagnostic protein markers for spontaneous cerebrospinal fluid rhinorrhea. J Proteome Res. 2013 Mar 1; 12(3):1254-65.
        View in: PubMed
      22. Karns K, Vogan JM, Qin Q, Hickey SF, Wilson SC, Hammond MC, Herr AE. Microfluidic screening of electrophoretic mobility shifts elucidates riboswitch binding function. J Am Chem Soc. 2013 Feb 27; 135(8):3136-43.
        View in: PubMed
      23. Apori AA, Herr AE. Chip-based immunoassays. Methods Mol Biol. 2013; 919:233-48.
        View in: PubMed
      24. Hughes AJ, Herr AE. Microfluidic Western blotting. Proc Natl Acad Sci U S A. 2012 Dec 26; 109(52):21450-5.
        View in: PubMed
      25. Wheeler AR, Herr AE. Mission impossible to mission control. Lab Chip. 2012 Oct 21; 12(20):3851-2.
        View in: PubMed
      26. Hughes AJ, Tentori AM, Herr AE. Bistable isoelectric point photoswitching in green fluorescent proteins observed by dynamic immunoprobed isoelectric focusing. J Am Chem Soc. 2012 Oct 24; 134(42):17582-91.
        View in: PubMed
      27. Hou C, Herr AE. Microfluidic integration of Western blotting is enabled by electrotransfer-assisted sodium dodecyl sulfate dilution. Analyst. 2013 Jan 7; 138(1):158-63.
        View in: PubMed
      28. Duncombe TA, Herr AE. Use of polyacrylamide gel moving boundary electrophoresis to enable low-power protein analysis in a compact microdevice. Anal Chem. 2012 Oct 16; 84(20):8740-7.
        View in: PubMed
      29. Denisin AK, Karns K, Herr AE. Post-collection processing of Schirmer strip-collected human tear fluid impacts protein content. Analyst. 2012 Nov 7; 137(21):5088-96.
        View in: PubMed
      30. Hughes AJ, Lin RK, Peehl DM, Herr AE. Microfluidic integration for automated targeted proteomic assays. Proc Natl Acad Sci U S A. 2012 Apr 17; 109(16):5972-7.
        View in: PubMed
      31. Kim D, Karns K, Tia SQ, He M, Herr AE. Electrostatic protein immobilization using charged polyacrylamide gels and cationic detergent microfluidic Western blotting. Anal Chem. 2012 Mar 6; 84(5):2533-40.
        View in: PubMed
      32. He M, Novak J, Julian BA, Herr AE. Membrane-assisted online renaturation for automated microfluidic lectin blotting. J Am Chem Soc. 2011 Dec 14; 133(49):19610-3.
        View in: PubMed
      33. Karns K, Herr AE. Microfluidic homo- and hetero-geneous immunoassays: a tool to accelerate protein biomarker development. Bioanalysis. 2011 Oct; 3(19):2161-5.
        View in: PubMed
      34. Karns K, Herr AE. Human tear protein analysis enabled by an alkaline microfluidic homogeneous immunoassay. Anal Chem. 2011 Nov 1; 83(21):8115-22.
        View in: PubMed
      35. Chen X, Kapil MA, Hughes AJ, Herr AE. Single-microchannel, multistep assay reports protein size and immunoaffinity. Anal Chem. 2011 Sep 1; 83(17):6573-9.
        View in: PubMed
      36. Tia SQ, He M, Kim D, Herr AE. Multianalyte on-chip native Western blotting. Anal Chem. 2011 May 1; 83(9):3581-8.
        View in: PubMed
      37. Kinney JS, Morelli T, Braun T, Ramseier CA, Herr AE, Sugai JV, Shelburne CE, Rayburn LA, Singh AK, Giannobile WV. Saliva/pathogen biomarker signatures and periodontal disease progression. J Dent Res. 2011 Jun; 90(6):752-8.
        View in: PubMed
      38. Apori AA, Herr AE. Homogeneous immunosubtraction integrated with sample preparation enabled by a microfluidic format. Anal Chem. 2011 Apr 1; 83(7):2691-8.
        View in: PubMed
      39. He M, Herr AE. Automated microfluidic protein immunoblotting. Nat Protoc. 2010 Nov; 5(11):1844-56.
        View in: PubMed
      40. Wheeler A, Herr A. Intimidating yet inspiring: emerging investigators special issue. Lab Chip. 2010 Sep 21; 10(18):2321-2.
        View in: PubMed
      41. Hughes AJ, Herr AE. Quantitative enzyme activity determination with zeptomole sensitivity by microfluidic gradient-gel zymography. Anal Chem. 2010 May 1; 82(9):3803-11.
        View in: PubMed
      42. Hou C, Herr AE. Ultrashort separation length homogeneous electrophoretic immunoassays using on-chip discontinuous polyacrylamide gels. Anal Chem. 2010 Apr 15; 82(8):3343-51.
        View in: PubMed
      43. He M, Herr AE. Polyacrylamide gel photopatterning enables automated protein immunoblotting in a two-dimensional microdevice. J Am Chem Soc. 2010 Mar 3; 132(8):2512-3.
        View in: PubMed
      44. He M, Herr AE. Microfluidic polyacrylamide gel electrophoresis with in situ immunoblotting for native protein analysis. Anal Chem. 2009 Oct 1; 81(19):8177-84.
        View in: PubMed
      45. Srivastava N, Brennan JS, Renzi RF, Wu M, Branda SS, Singh AK, Herr AE. Fully integrated microfluidic platform enabling automated phosphoprofiling of macrophage response. Anal Chem. 2009 May 1; 81(9):3261-9.
        View in: PubMed
      46. Tia S, Herr AE. On-chip technologies for multidimensional separations. Lab Chip. 2009 Sep 7; 9(17):2524-36.
        View in: PubMed
      47. Ramseier CA, Kinney JS, Herr AE, Braun T, Sugai JV, Shelburne CA, Rayburn LA, Tran HM, Singh AK, Giannobile WV. Identification of pathogen and host-response markers correlated with periodontal disease. J Periodontol. 2009 Mar; 80(3):436-46.
        View in: PubMed
      48. Hou C, Herr AE. Clinically relevant advances in on-chip affinity-based electrophoresis and electrochromatography. Electrophoresis. 2008 Aug; 29(16):3306-19.
        View in: PubMed
      49. Lo CT, Throckmorton DJ, Singh AK, Herr AE. Photopolymerized diffusion-defined polyacrylamide gradient gels for on-chip protein sizing. Lab Chip. 2008 Aug; 8(8):1273-9.
        View in: PubMed
      50. Herr AE, Hatch AV, Throckmorton DJ, Tran HM, Brennan JS, Giannobile WV, Singh AK. Microfluidic immunoassays as rapid saliva-based clinical diagnostics. Proc Natl Acad Sci U S A. 2007 Mar 27; 104(13):5268-73.
        View in: PubMed
      51. Herr AE, Hatch AV, Giannobile WV, Throckmorton DJ, Tran HM, Brennan JS, Singh AK. Integrated microfluidic platform for oral diagnostics. Ann N Y Acad Sci. 2007 Mar; 1098:362-74.
        View in: PubMed
      52. Hatch AV, Herr AE, Throckmorton DJ, Brennan JS, Singh AK. Integrated preconcentration SDS-PAGE of proteins in microchips using photopatterned cross-linked polyacrylamide gels. Anal Chem. 2006 Jul 15; 78(14):4976-84.
        View in: PubMed
      53. Rucker VC, Havenstrite KL, Simmons BA, Sickafoose SM, Herr AE, Shediac R. Functional antibody immobilization on 3-dimensional polymeric surfaces generated by reactive ion etching. Langmuir. 2005 Aug 16; 21(17):7621-5.
        View in: PubMed
      54. Rucker VC, Havenstrite KL, Herr AE. Antibody microarrays for native toxin detection. Anal Biochem. 2005 Apr 15; 339(2):262-70.
        View in: PubMed
      55. Herr AE, Throckmorton DJ, Davenport AA, Singh AK. On-chip native gel electrophoresis-based immunoassays for tetanus antibody and toxin. Anal Chem. 2005 Jan 15; 77(2):585-90.
        View in: PubMed
      56. Herr AE, Singh AK. Photopolymerized cross-linked polyacrylamide gels for on-chip protein sizing. Anal Chem. 2004 Aug 15; 76(16):4727-33.
        View in: PubMed
      57. Herr AE, Molho JI, Drouvalakis KA, Mikkelsen JC, Utz PJ, Santiago JG, Kenny TW. On-chip coupling of isoelectric focusing and free solution electrophoresis for multidimensional separations. Anal Chem. 2003 Mar 1; 75(5):1180-7.
        View in: PubMed
      58. Raisi F, Belgrader P, Borkholder DA, Herr AE, Kintz GJ, Pourhamadi F, Taylor MT, Northrup MA. Microchip isoelectric focusing using a miniature scanning detection system. Electrophoresis. 2001 Jul; 22(11):2291-5.
        View in: PubMed
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